Gene : SapurV1A.1422s0040 S. purpurea v1.0

Defline:  (1 of 34) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  4
Name:  ? SapurV1A.1422s0040 Secondary Identifier:  ? PAC:31435978

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1422s0040 0.5kb upstream 0.5kb upstream 3898 true Scaffold1422: 36876-40773 Salix purpurea
SapurV1A.1422s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold1422: 40274-40773 Salix purpurea
SapurV1A.1422s0040 0.5kb downstream 0.5kb downstream 3898 true Scaffold1422: 36376-40273 Salix purpurea
SapurV1A.1422s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold1422: 36376-36875 Salix purpurea
SapurV1A.1422s0040 1.0kb upstream 1.0kb upstream 4398 true Scaffold1422: 36876-41273 Salix purpurea
SapurV1A.1422s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold1422: 40274-41273 Salix purpurea
SapurV1A.1422s0040 1.0kb downstream 1.0kb downstream 4398 true Scaffold1422: 35876-40273 Salix purpurea
SapurV1A.1422s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold1422: 35876-36875 Salix purpurea
SapurV1A.1422s0040 2.0kb upstream 2.0kb upstream 5398 true Scaffold1422: 36876-42273 Salix purpurea
SapurV1A.1422s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold1422: 40274-42273 Salix purpurea
SapurV1A.1422s0040 2.0kb downstream 2.0kb downstream 5398 true Scaffold1422: 34876-40273 Salix purpurea
SapurV1A.1422s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold1422: 34876-36875 Salix purpurea
SapurV1A.1422s0040 5.0kb upstream 5.0kb upstream 8398 true Scaffold1422: 36876-45273 Salix purpurea
SapurV1A.1422s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold1422: 40274-45273 Salix purpurea
SapurV1A.1422s0040 5.0kb downstream 5.0kb downstream 8398 true Scaffold1422: 31876-40273 Salix purpurea
SapurV1A.1422s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold1422: 31876-36875 Salix purpurea
SapurV1A.1422s0040 10.0kb upstream 10.0kb upstream 13398 true Scaffold1422: 36876-50273 Salix purpurea
SapurV1A.1422s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold1422: 40274-50273 Salix purpurea
SapurV1A.1422s0040 10.0kb downstream 10.0kb downstream 13398 true Scaffold1422: 26876-40273 Salix purpurea
SapurV1A.1422s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold1422: 26876-36875 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455477 5262 Malpighiales View MSA
124242444 5268 Malvidae View MSA
124060677 5270 Rosid View MSA
123746655 5271 Pentapetalae View MSA
122793179 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain