Gene : SapurV1A.2277s0020 S. purpurea v1.0

Defline:  (1 of 4) KOG0181 - 20S proteasome, regulatory subunit alpha type PSMA2/PRE8 Genomic Order:  2
Name:  ? SapurV1A.2277s0020 Secondary Identifier:  ? PAC:31450283

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2277s0020 0.5kb upstream 0.5kb upstream 6051 true Scaffold2277: 6792-12842 Salix purpurea
SapurV1A.2277s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2277: 12343-12842 Salix purpurea
SapurV1A.2277s0020 0.5kb downstream 0.5kb downstream 6051 true Scaffold2277: 6292-12342 Salix purpurea
SapurV1A.2277s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2277: 6292-6791 Salix purpurea
SapurV1A.2277s0020 1.0kb upstream 1.0kb upstream 6551 true Scaffold2277: 6792-13342 Salix purpurea
SapurV1A.2277s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2277: 12343-13342 Salix purpurea
SapurV1A.2277s0020 1.0kb downstream 1.0kb downstream 6551 true Scaffold2277: 5792-12342 Salix purpurea
SapurV1A.2277s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2277: 5792-6791 Salix purpurea
SapurV1A.2277s0020 2.0kb upstream 2.0kb upstream 7551 true Scaffold2277: 6792-14342 Salix purpurea
SapurV1A.2277s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold2277: 12343-14342 Salix purpurea
SapurV1A.2277s0020 2.0kb downstream 2.0kb downstream 7551 true Scaffold2277: 4792-12342 Salix purpurea
SapurV1A.2277s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2277: 4792-6791 Salix purpurea
SapurV1A.2277s0020 5.0kb upstream 5.0kb upstream 10551 true Scaffold2277: 6792-17342 Salix purpurea
SapurV1A.2277s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold2277: 12343-17342 Salix purpurea
SapurV1A.2277s0020 5.0kb downstream 5.0kb downstream 10551 true Scaffold2277: 1792-12342 Salix purpurea
SapurV1A.2277s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold2277: 1792-6791 Salix purpurea
SapurV1A.2277s0020 10.0kb upstream 10.0kb upstream 15551 true Scaffold2277: 6792-22342 Salix purpurea
SapurV1A.2277s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold2277: 12343-22342 Salix purpurea
SapurV1A.2277s0020 10.0kb downstream 10.0kb downstream 12342 true Scaffold2277: 1-12342 Salix purpurea
SapurV1A.2277s0020 10.0kb downstream 10.0kb downstream 6791 false Scaffold2277: 1-6791 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026291 5273 Angiosperm View MSA
122451983 5262 Malpighiales View MSA
124241127 5268 Malvidae View MSA
124069190 5270 Rosid View MSA
123746972 5271 Pentapetalae View MSA
122795211 5272 Eudicot View MSA
121350421 5274 Embryophyte View MSA
123426464 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain