Gene : SapurV1A.2281s0020 S. purpurea v1.0
Defline:  (1 of 4) 2.7.7.15 - Choline-phosphate cytidylyltransferase / Phosphorylcholine transferase Genomic Order:  2
Name:  ? SapurV1A.2281s0020 Secondary Identifier:  ? PAC:31442889
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-3561 Salix purpurea pathologic  
Spurpurea PWY3O-450 Salix purpurea pathologic  
Spurpurea PWY4FS-2 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2281s0020 0.5kb upstream 0.5kb upstream 4234 true Scaffold2281: 23565-27798 Salix purpurea
SapurV1A.2281s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2281: 27299-27798 Salix purpurea
SapurV1A.2281s0020 0.5kb downstream 0.5kb downstream 4234 true Scaffold2281: 23065-27298 Salix purpurea
SapurV1A.2281s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2281: 23065-23564 Salix purpurea
SapurV1A.2281s0020 1.0kb upstream 1.0kb upstream 4734 true Scaffold2281: 23565-28298 Salix purpurea
SapurV1A.2281s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2281: 27299-28298 Salix purpurea
SapurV1A.2281s0020 1.0kb downstream 1.0kb downstream 4734 true Scaffold2281: 22565-27298 Salix purpurea
SapurV1A.2281s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2281: 22565-23564 Salix purpurea
SapurV1A.2281s0020 2.0kb upstream 2.0kb upstream 5734 true Scaffold2281: 23565-29298 Salix purpurea
SapurV1A.2281s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold2281: 27299-29298 Salix purpurea
SapurV1A.2281s0020 2.0kb downstream 2.0kb downstream 5734 true Scaffold2281: 21565-27298 Salix purpurea
SapurV1A.2281s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2281: 21565-23564 Salix purpurea
SapurV1A.2281s0020 5.0kb upstream 5.0kb upstream 6090 true Scaffold2281: 23565-29654 Salix purpurea
SapurV1A.2281s0020 5.0kb upstream 5.0kb upstream 2356 false Scaffold2281: 27299-29654 Salix purpurea
SapurV1A.2281s0020 5.0kb downstream 5.0kb downstream 8734 true Scaffold2281: 18565-27298 Salix purpurea
SapurV1A.2281s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold2281: 18565-23564 Salix purpurea
SapurV1A.2281s0020 10.0kb upstream 10.0kb upstream 6090 true Scaffold2281: 23565-29654 Salix purpurea
SapurV1A.2281s0020 10.0kb upstream 10.0kb upstream 2356 false Scaffold2281: 27299-29654 Salix purpurea
SapurV1A.2281s0020 10.0kb downstream 10.0kb downstream 13734 true Scaffold2281: 13565-27298 Salix purpurea
SapurV1A.2281s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold2281: 13565-23564 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460777 5262 Malpighiales View MSA
124245941 5268 Malvidae View MSA
124069985 5270 Rosid View MSA
123749333 5271 Pentapetalae View MSA
122792398 5272 Eudicot View MSA
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain