Gene : SapurV1A.2179s0020 S. purpurea v1.0
Defline:  (1 of 8) K00454 - lipoxygenase (LOX2S) Genomic Order:  2
Name:  ? SapurV1A.2179s0020 Secondary Identifier:  ? PAC:31455124
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-5409 Salix purpurea pathologic  
Spurpurea PWY-735 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2179s0020 0.5kb upstream 0.5kb upstream 5056 true Scaffold2179: 17980-23035 Salix purpurea
SapurV1A.2179s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 17980-18479 Salix purpurea
SapurV1A.2179s0020 0.5kb downstream 0.5kb downstream 5056 true Scaffold2179: 18480-23535 Salix purpurea
SapurV1A.2179s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 23036-23535 Salix purpurea
SapurV1A.2179s0020 1.0kb upstream 1.0kb upstream 5556 true Scaffold2179: 17480-23035 Salix purpurea
SapurV1A.2179s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 17480-18479 Salix purpurea
SapurV1A.2179s0020 1.0kb downstream 1.0kb downstream 5556 true Scaffold2179: 18480-24035 Salix purpurea
SapurV1A.2179s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 23036-24035 Salix purpurea
SapurV1A.2179s0020 2.0kb upstream 2.0kb upstream 6556 true Scaffold2179: 16480-23035 Salix purpurea
SapurV1A.2179s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 16480-18479 Salix purpurea
SapurV1A.2179s0020 2.0kb downstream 2.0kb downstream 6556 true Scaffold2179: 18480-25035 Salix purpurea
SapurV1A.2179s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 23036-25035 Salix purpurea
SapurV1A.2179s0020 5.0kb upstream 5.0kb upstream 9556 true Scaffold2179: 13480-23035 Salix purpurea
SapurV1A.2179s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 13480-18479 Salix purpurea
SapurV1A.2179s0020 5.0kb downstream 5.0kb downstream 9556 true Scaffold2179: 18480-28035 Salix purpurea
SapurV1A.2179s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold2179: 23036-28035 Salix purpurea
SapurV1A.2179s0020 10.0kb upstream 10.0kb upstream 14556 true Scaffold2179: 8480-23035 Salix purpurea
SapurV1A.2179s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold2179: 8480-18479 Salix purpurea
SapurV1A.2179s0020 10.0kb downstream 10.0kb downstream 13236 true Scaffold2179: 18480-31715 Salix purpurea
SapurV1A.2179s0020 10.0kb downstream 10.0kb downstream 8680 false Scaffold2179: 23036-31715 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121554851 5273 Angiosperm View MSA
122411079 5262 Malpighiales View MSA
124205920 5268 Malvidae View MSA
123924984 5270 Rosid View MSA
123505024 5271 Pentapetalae View MSA
122540134 5272 Eudicot View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain