Gene : SapurV1A.2187s0020 S. purpurea v1.0
Defline:  (1 of 213) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2
Name:  ? SapurV1A.2187s0020 Secondary Identifier:  ? PAC:31424380
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2187s0020 0.5kb upstream 0.5kb upstream 4061 true Scaffold2187: 1379-5439 Salix purpurea
SapurV1A.2187s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2187: 1379-1878 Salix purpurea
SapurV1A.2187s0020 0.5kb downstream 0.5kb downstream 4061 true Scaffold2187: 1879-5939 Salix purpurea
SapurV1A.2187s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2187: 5440-5939 Salix purpurea
SapurV1A.2187s0020 1.0kb upstream 1.0kb upstream 4561 true Scaffold2187: 879-5439 Salix purpurea
SapurV1A.2187s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2187: 879-1878 Salix purpurea
SapurV1A.2187s0020 1.0kb downstream 1.0kb downstream 4561 true Scaffold2187: 1879-6439 Salix purpurea
SapurV1A.2187s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2187: 5440-6439 Salix purpurea
SapurV1A.2187s0020 2.0kb upstream 2.0kb upstream 5439 true Scaffold2187: 1-5439 Salix purpurea
SapurV1A.2187s0020 2.0kb upstream 2.0kb upstream 1878 false Scaffold2187: 1-1878 Salix purpurea
SapurV1A.2187s0020 2.0kb downstream 2.0kb downstream 5561 true Scaffold2187: 1879-7439 Salix purpurea
SapurV1A.2187s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2187: 5440-7439 Salix purpurea
SapurV1A.2187s0020 5.0kb upstream 5.0kb upstream 5439 true Scaffold2187: 1-5439 Salix purpurea
SapurV1A.2187s0020 5.0kb upstream 5.0kb upstream 1878 false Scaffold2187: 1-1878 Salix purpurea
SapurV1A.2187s0020 5.0kb downstream 5.0kb downstream 8561 true Scaffold2187: 1879-10439 Salix purpurea
SapurV1A.2187s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold2187: 5440-10439 Salix purpurea
SapurV1A.2187s0020 10.0kb upstream 10.0kb upstream 5439 true Scaffold2187: 1-5439 Salix purpurea
SapurV1A.2187s0020 10.0kb upstream 10.0kb upstream 1878 false Scaffold2187: 1-1878 Salix purpurea
SapurV1A.2187s0020 10.0kb downstream 10.0kb downstream 13561 true Scaffold2187: 1879-15439 Salix purpurea
SapurV1A.2187s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold2187: 5440-15439 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452166 5262 Malpighiales View MSA
124245757 5268 Malvidae View MSA
124072513 5270 Rosid View MSA
123747473 5271 Pentapetalae View MSA
122794645 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain