Gene : SapurV1A.2241s0010 S. purpurea v1.0
Defline:  (1 of 42) PF00954//PF01453//PF07714//PF08276//PF11883 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) // Domain of unknown function (DUF3403) (DUF3403) Genomic Order:  1
Name:  ? SapurV1A.2241s0010 Secondary Identifier:  ? PAC:31455803
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2241s0010 0.5kb upstream 0.5kb upstream 4638 true Scaffold2241: 17-4654 Salix purpurea
SapurV1A.2241s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2241: 4155-4654 Salix purpurea
SapurV1A.2241s0010 0.5kb downstream 0.5kb downstream 4154 true Scaffold2241: 1-4154 Salix purpurea
SapurV1A.2241s0010 0.5kb downstream 0.5kb downstream 16 false Scaffold2241: 1-16 Salix purpurea
SapurV1A.2241s0010 1.0kb upstream 1.0kb upstream 5138 true Scaffold2241: 17-5154 Salix purpurea
SapurV1A.2241s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2241: 4155-5154 Salix purpurea
SapurV1A.2241s0010 1.0kb downstream 1.0kb downstream 4154 true Scaffold2241: 1-4154 Salix purpurea
SapurV1A.2241s0010 1.0kb downstream 1.0kb downstream 16 false Scaffold2241: 1-16 Salix purpurea
SapurV1A.2241s0010 2.0kb upstream 2.0kb upstream 6138 true Scaffold2241: 17-6154 Salix purpurea
SapurV1A.2241s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2241: 4155-6154 Salix purpurea
SapurV1A.2241s0010 2.0kb downstream 2.0kb downstream 4154 true Scaffold2241: 1-4154 Salix purpurea
SapurV1A.2241s0010 2.0kb downstream 2.0kb downstream 16 false Scaffold2241: 1-16 Salix purpurea
SapurV1A.2241s0010 5.0kb upstream 5.0kb upstream 9138 true Scaffold2241: 17-9154 Salix purpurea
SapurV1A.2241s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2241: 4155-9154 Salix purpurea
SapurV1A.2241s0010 5.0kb downstream 5.0kb downstream 4154 true Scaffold2241: 1-4154 Salix purpurea
SapurV1A.2241s0010 5.0kb downstream 5.0kb downstream 16 false Scaffold2241: 1-16 Salix purpurea
SapurV1A.2241s0010 10.0kb upstream 10.0kb upstream 14138 true Scaffold2241: 17-14154 Salix purpurea
SapurV1A.2241s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold2241: 4155-14154 Salix purpurea
SapurV1A.2241s0010 10.0kb downstream 10.0kb downstream 4154 true Scaffold2241: 1-4154 Salix purpurea
SapurV1A.2241s0010 10.0kb downstream 10.0kb downstream 16 false Scaffold2241: 1-16 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426471 5262 Malpighiales View MSA
124252991 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain