Gene : SapurV1A.2080s0030 S. purpurea v1.0
Defline:  (1 of 3) PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Genomic Order:  3
Name:  ? SapurV1A.2080s0030 Secondary Identifier:  ? PAC:31423286
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2080s0030 0.5kb upstream 0.5kb upstream 4177 true Scaffold2080: 20969-25145 Salix purpurea
SapurV1A.2080s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold2080: 20969-21468 Salix purpurea
SapurV1A.2080s0030 0.5kb downstream 0.5kb downstream 4177 true Scaffold2080: 21469-25645 Salix purpurea
SapurV1A.2080s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold2080: 25146-25645 Salix purpurea
SapurV1A.2080s0030 1.0kb upstream 1.0kb upstream 4677 true Scaffold2080: 20469-25145 Salix purpurea
SapurV1A.2080s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold2080: 20469-21468 Salix purpurea
SapurV1A.2080s0030 1.0kb downstream 1.0kb downstream 4677 true Scaffold2080: 21469-26145 Salix purpurea
SapurV1A.2080s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold2080: 25146-26145 Salix purpurea
SapurV1A.2080s0030 2.0kb upstream 2.0kb upstream 5677 true Scaffold2080: 19469-25145 Salix purpurea
SapurV1A.2080s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold2080: 19469-21468 Salix purpurea
SapurV1A.2080s0030 2.0kb downstream 2.0kb downstream 5677 true Scaffold2080: 21469-27145 Salix purpurea
SapurV1A.2080s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold2080: 25146-27145 Salix purpurea
SapurV1A.2080s0030 5.0kb upstream 5.0kb upstream 8677 true Scaffold2080: 16469-25145 Salix purpurea
SapurV1A.2080s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold2080: 16469-21468 Salix purpurea
SapurV1A.2080s0030 5.0kb downstream 5.0kb downstream 8677 true Scaffold2080: 21469-30145 Salix purpurea
SapurV1A.2080s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold2080: 25146-30145 Salix purpurea
SapurV1A.2080s0030 10.0kb upstream 10.0kb upstream 13677 true Scaffold2080: 11469-25145 Salix purpurea
SapurV1A.2080s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold2080: 11469-21468 Salix purpurea
SapurV1A.2080s0030 10.0kb downstream 10.0kb downstream 13654 true Scaffold2080: 21469-35122 Salix purpurea
SapurV1A.2080s0030 10.0kb downstream 10.0kb downstream 9977 false Scaffold2080: 25146-35122 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449311 5262 Malpighiales View MSA
124247205 5268 Malvidae View MSA
124063481 5270 Rosid View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain