Gene : SapurV1A.2110s0010 S. purpurea v1.0
Defline:  (1 of 2) PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? SapurV1A.2110s0010 Secondary Identifier:  ? PAC:31407624
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea GLYSYN-PWY Salix purpurea pathologic  
Spurpurea PWY-2161 Salix purpurea pathologic  
Spurpurea PWY-3841 Salix purpurea pathologic  
Spurpurea SER-GLYSYN-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2110s0010 0.5kb upstream 0.5kb upstream 2980 true Scaffold2110: 7701-10680 Salix purpurea
SapurV1A.2110s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2110: 7701-8200 Salix purpurea
SapurV1A.2110s0010 0.5kb downstream 0.5kb downstream 2980 true Scaffold2110: 8201-11180 Salix purpurea
SapurV1A.2110s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold2110: 10681-11180 Salix purpurea
SapurV1A.2110s0010 1.0kb upstream 1.0kb upstream 3480 true Scaffold2110: 7201-10680 Salix purpurea
SapurV1A.2110s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2110: 7201-8200 Salix purpurea
SapurV1A.2110s0010 1.0kb downstream 1.0kb downstream 3480 true Scaffold2110: 8201-11680 Salix purpurea
SapurV1A.2110s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold2110: 10681-11680 Salix purpurea
SapurV1A.2110s0010 2.0kb upstream 2.0kb upstream 4480 true Scaffold2110: 6201-10680 Salix purpurea
SapurV1A.2110s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2110: 6201-8200 Salix purpurea
SapurV1A.2110s0010 2.0kb downstream 2.0kb downstream 4480 true Scaffold2110: 8201-12680 Salix purpurea
SapurV1A.2110s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold2110: 10681-12680 Salix purpurea
SapurV1A.2110s0010 5.0kb upstream 5.0kb upstream 7480 true Scaffold2110: 3201-10680 Salix purpurea
SapurV1A.2110s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2110: 3201-8200 Salix purpurea
SapurV1A.2110s0010 5.0kb downstream 5.0kb downstream 7480 true Scaffold2110: 8201-15680 Salix purpurea
SapurV1A.2110s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold2110: 10681-15680 Salix purpurea
SapurV1A.2110s0010 10.0kb upstream 10.0kb upstream 10680 true Scaffold2110: 1-10680 Salix purpurea
SapurV1A.2110s0010 10.0kb upstream 10.0kb upstream 8200 false Scaffold2110: 1-8200 Salix purpurea
SapurV1A.2110s0010 10.0kb downstream 10.0kb downstream 12480 true Scaffold2110: 8201-20680 Salix purpurea
SapurV1A.2110s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold2110: 10681-20680 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458570 5262 Malpighiales View MSA
124241097 5268 Malvidae View MSA
124067933 5270 Rosid View MSA
123746459 5271 Pentapetalae View MSA
122786293 5272 Eudicot View MSA
122042145 5273 Angiosperm View MSA
121347378 5274 Embryophyte View MSA
123426459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain