Gene : SapurV1A.1971s0020 S. purpurea v1.0
Defline:  (1 of 2) PTHR10969//PTHR10969:SF39 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8F Genomic Order:  2
Name:  ? SapurV1A.1971s0020 Secondary Identifier:  ? PAC:31426519
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1971s0020 0.5kb upstream 0.5kb upstream 2911 true Scaffold1971: 16738-19648 Salix purpurea
SapurV1A.1971s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold1971: 16738-17237 Salix purpurea
SapurV1A.1971s0020 0.5kb downstream 0.5kb downstream 2911 true Scaffold1971: 17238-20148 Salix purpurea
SapurV1A.1971s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold1971: 19649-20148 Salix purpurea
SapurV1A.1971s0020 1.0kb upstream 1.0kb upstream 3411 true Scaffold1971: 16238-19648 Salix purpurea
SapurV1A.1971s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold1971: 16238-17237 Salix purpurea
SapurV1A.1971s0020 1.0kb downstream 1.0kb downstream 3411 true Scaffold1971: 17238-20648 Salix purpurea
SapurV1A.1971s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold1971: 19649-20648 Salix purpurea
SapurV1A.1971s0020 2.0kb upstream 2.0kb upstream 4411 true Scaffold1971: 15238-19648 Salix purpurea
SapurV1A.1971s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold1971: 15238-17237 Salix purpurea
SapurV1A.1971s0020 2.0kb downstream 2.0kb downstream 4411 true Scaffold1971: 17238-21648 Salix purpurea
SapurV1A.1971s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold1971: 19649-21648 Salix purpurea
SapurV1A.1971s0020 5.0kb upstream 5.0kb upstream 7411 true Scaffold1971: 12238-19648 Salix purpurea
SapurV1A.1971s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold1971: 12238-17237 Salix purpurea
SapurV1A.1971s0020 5.0kb downstream 5.0kb downstream 7411 true Scaffold1971: 17238-24648 Salix purpurea
SapurV1A.1971s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold1971: 19649-24648 Salix purpurea
SapurV1A.1971s0020 10.0kb upstream 10.0kb upstream 12411 true Scaffold1971: 7238-19648 Salix purpurea
SapurV1A.1971s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold1971: 7238-17237 Salix purpurea
SapurV1A.1971s0020 10.0kb downstream 10.0kb downstream 12411 true Scaffold1971: 17238-29648 Salix purpurea
SapurV1A.1971s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold1971: 19649-29648 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427524 5262 Malpighiales View MSA
124243893 5268 Malvidae View MSA
124068042 5270 Rosid View MSA
123752408 5271 Pentapetalae View MSA
122791477 5272 Eudicot View MSA
122048918 5273 Angiosperm View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain