Gene : SapurV1A.1939s0050 S. purpurea v1.0
Defline:  (1 of 4) PTHR26312//PTHR26312:SF76 - FAMILY NOT NAMED // TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN Genomic Order:  5
Name:  ? SapurV1A.1939s0050 Secondary Identifier:  ? PAC:31424277
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1939s0050 0.5kb upstream 0.5kb upstream 1889 true Scaffold1939: 19118-21006 Salix purpurea
SapurV1A.1939s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold1939: 19118-19617 Salix purpurea
SapurV1A.1939s0050 0.5kb downstream 0.5kb downstream 1889 true Scaffold1939: 19618-21506 Salix purpurea
SapurV1A.1939s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold1939: 21007-21506 Salix purpurea
SapurV1A.1939s0050 1.0kb upstream 1.0kb upstream 2389 true Scaffold1939: 18618-21006 Salix purpurea
SapurV1A.1939s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold1939: 18618-19617 Salix purpurea
SapurV1A.1939s0050 1.0kb downstream 1.0kb downstream 2389 true Scaffold1939: 19618-22006 Salix purpurea
SapurV1A.1939s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold1939: 21007-22006 Salix purpurea
SapurV1A.1939s0050 2.0kb upstream 2.0kb upstream 3389 true Scaffold1939: 17618-21006 Salix purpurea
SapurV1A.1939s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold1939: 17618-19617 Salix purpurea
SapurV1A.1939s0050 2.0kb downstream 2.0kb downstream 3389 true Scaffold1939: 19618-23006 Salix purpurea
SapurV1A.1939s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold1939: 21007-23006 Salix purpurea
SapurV1A.1939s0050 5.0kb upstream 5.0kb upstream 6389 true Scaffold1939: 14618-21006 Salix purpurea
SapurV1A.1939s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold1939: 14618-19617 Salix purpurea
SapurV1A.1939s0050 5.0kb downstream 5.0kb downstream 6389 true Scaffold1939: 19618-26006 Salix purpurea
SapurV1A.1939s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold1939: 21007-26006 Salix purpurea
SapurV1A.1939s0050 10.0kb upstream 10.0kb upstream 11389 true Scaffold1939: 9618-21006 Salix purpurea
SapurV1A.1939s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold1939: 9618-19617 Salix purpurea
SapurV1A.1939s0050 10.0kb downstream 10.0kb downstream 11389 true Scaffold1939: 19618-31006 Salix purpurea
SapurV1A.1939s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold1939: 21007-31006 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454605 5262 Malpighiales View MSA
124237294 5268 Malvidae View MSA
124062008 5270 Rosid View MSA
123737830 5271 Pentapetalae View MSA
122791127 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain