Gene : SapurV1A.1939s0060 S. purpurea v1.0
Defline:  (1 of 2) PF12552//PF14309//PF14383 - Protein of unknown function (DUF3741) (DUF3741) // Domain of unknown function (DUF4378) (DUF4378) // DUF761-associated sequence motif (VARLMGL) Genomic Order:  6
Name:  ? SapurV1A.1939s0060 Secondary Identifier:  ? PAC:31424279
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1939s0060 0.5kb upstream 0.5kb upstream 6564 true Scaffold1939: 32260-38823 Salix purpurea
SapurV1A.1939s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold1939: 32260-32759 Salix purpurea
SapurV1A.1939s0060 0.5kb downstream 0.5kb downstream 6564 true Scaffold1939: 32760-39323 Salix purpurea
SapurV1A.1939s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold1939: 38824-39323 Salix purpurea
SapurV1A.1939s0060 1.0kb upstream 1.0kb upstream 7064 true Scaffold1939: 31760-38823 Salix purpurea
SapurV1A.1939s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold1939: 31760-32759 Salix purpurea
SapurV1A.1939s0060 1.0kb downstream 1.0kb downstream 7064 true Scaffold1939: 32760-39823 Salix purpurea
SapurV1A.1939s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold1939: 38824-39823 Salix purpurea
SapurV1A.1939s0060 2.0kb upstream 2.0kb upstream 8064 true Scaffold1939: 30760-38823 Salix purpurea
SapurV1A.1939s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold1939: 30760-32759 Salix purpurea
SapurV1A.1939s0060 2.0kb downstream 2.0kb downstream 7365 true Scaffold1939: 32760-40124 Salix purpurea
SapurV1A.1939s0060 2.0kb downstream 2.0kb downstream 1301 false Scaffold1939: 38824-40124 Salix purpurea
SapurV1A.1939s0060 5.0kb upstream 5.0kb upstream 11064 true Scaffold1939: 27760-38823 Salix purpurea
SapurV1A.1939s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold1939: 27760-32759 Salix purpurea
SapurV1A.1939s0060 5.0kb downstream 5.0kb downstream 7365 true Scaffold1939: 32760-40124 Salix purpurea
SapurV1A.1939s0060 5.0kb downstream 5.0kb downstream 1301 false Scaffold1939: 38824-40124 Salix purpurea
SapurV1A.1939s0060 10.0kb upstream 10.0kb upstream 16064 true Scaffold1939: 22760-38823 Salix purpurea
SapurV1A.1939s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold1939: 22760-32759 Salix purpurea
SapurV1A.1939s0060 10.0kb downstream 10.0kb downstream 7365 true Scaffold1939: 32760-40124 Salix purpurea
SapurV1A.1939s0060 10.0kb downstream 10.0kb downstream 1301 false Scaffold1939: 38824-40124 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449739 5262 Malpighiales View MSA
124251546 5268 Malvidae View MSA
124070325 5270 Rosid View MSA
123752658 5271 Pentapetalae View MSA
122796149 5272 Eudicot View MSA
122047925 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain