Gene : SapurV1A.1945s0010 S. purpurea v1.0
Defline:  (1 of 3) K01883 - cysteinyl-tRNA synthetase (CARS, cysS) Genomic Order:  1
Name:  ? SapurV1A.1945s0010 Secondary Identifier:  ? PAC:31419581
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea TRNA-CHARGING-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1945s0010 0.5kb upstream 0.5kb upstream 7320 true Scaffold1945: 1864-9183 Salix purpurea
SapurV1A.1945s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1945: 8684-9183 Salix purpurea
SapurV1A.1945s0010 0.5kb downstream 0.5kb downstream 7320 true Scaffold1945: 1364-8683 Salix purpurea
SapurV1A.1945s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1945: 1364-1863 Salix purpurea
SapurV1A.1945s0010 1.0kb upstream 1.0kb upstream 7820 true Scaffold1945: 1864-9683 Salix purpurea
SapurV1A.1945s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1945: 8684-9683 Salix purpurea
SapurV1A.1945s0010 1.0kb downstream 1.0kb downstream 7820 true Scaffold1945: 864-8683 Salix purpurea
SapurV1A.1945s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1945: 864-1863 Salix purpurea
SapurV1A.1945s0010 2.0kb upstream 2.0kb upstream 8820 true Scaffold1945: 1864-10683 Salix purpurea
SapurV1A.1945s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1945: 8684-10683 Salix purpurea
SapurV1A.1945s0010 2.0kb downstream 2.0kb downstream 8683 true Scaffold1945: 1-8683 Salix purpurea
SapurV1A.1945s0010 2.0kb downstream 2.0kb downstream 1863 false Scaffold1945: 1-1863 Salix purpurea
SapurV1A.1945s0010 5.0kb upstream 5.0kb upstream 11820 true Scaffold1945: 1864-13683 Salix purpurea
SapurV1A.1945s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1945: 8684-13683 Salix purpurea
SapurV1A.1945s0010 5.0kb downstream 5.0kb downstream 8683 true Scaffold1945: 1-8683 Salix purpurea
SapurV1A.1945s0010 5.0kb downstream 5.0kb downstream 1863 false Scaffold1945: 1-1863 Salix purpurea
SapurV1A.1945s0010 10.0kb upstream 10.0kb upstream 16820 true Scaffold1945: 1864-18683 Salix purpurea
SapurV1A.1945s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1945: 8684-18683 Salix purpurea
SapurV1A.1945s0010 10.0kb downstream 10.0kb downstream 8683 true Scaffold1945: 1-8683 Salix purpurea
SapurV1A.1945s0010 10.0kb downstream 10.0kb downstream 1863 false Scaffold1945: 1-1863 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457176 5262 Malpighiales View MSA
124250049 5268 Malvidae View MSA
124063129 5270 Rosid View MSA
123736819 5271 Pentapetalae View MSA
122791424 5272 Eudicot View MSA
122050932 5273 Angiosperm View MSA
121350340 5274 Embryophyte View MSA
123427761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain