Gene : SapurV1A.1780s0050 S. purpurea v1.0
Defline:  (1 of 3) PTHR13301:SF33 - CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 1 [UDP-FORMING] Genomic Order:  5
Name:  ? SapurV1A.1780s0050 Secondary Identifier:  ? PAC:31412532
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-1001 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1780s0050 0.5kb upstream 0.5kb upstream 7094 true Scaffold1780: 40504-47597 Salix purpurea
SapurV1A.1780s0050 0.5kb upstream 0.5kb upstream 11 false Scaffold1780: 47587-47597 Salix purpurea
SapurV1A.1780s0050 0.5kb downstream 0.5kb downstream 7583 true Scaffold1780: 40004-47586 Salix purpurea
SapurV1A.1780s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold1780: 40004-40503 Salix purpurea
SapurV1A.1780s0050 1.0kb upstream 1.0kb upstream 7094 true Scaffold1780: 40504-47597 Salix purpurea
SapurV1A.1780s0050 1.0kb upstream 1.0kb upstream 11 false Scaffold1780: 47587-47597 Salix purpurea
SapurV1A.1780s0050 1.0kb downstream 1.0kb downstream 8083 true Scaffold1780: 39504-47586 Salix purpurea
SapurV1A.1780s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold1780: 39504-40503 Salix purpurea
SapurV1A.1780s0050 2.0kb upstream 2.0kb upstream 7094 true Scaffold1780: 40504-47597 Salix purpurea
SapurV1A.1780s0050 2.0kb upstream 2.0kb upstream 11 false Scaffold1780: 47587-47597 Salix purpurea
SapurV1A.1780s0050 2.0kb downstream 2.0kb downstream 9083 true Scaffold1780: 38504-47586 Salix purpurea
SapurV1A.1780s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold1780: 38504-40503 Salix purpurea
SapurV1A.1780s0050 5.0kb upstream 5.0kb upstream 7094 true Scaffold1780: 40504-47597 Salix purpurea
SapurV1A.1780s0050 5.0kb upstream 5.0kb upstream 11 false Scaffold1780: 47587-47597 Salix purpurea
SapurV1A.1780s0050 5.0kb downstream 5.0kb downstream 12083 true Scaffold1780: 35504-47586 Salix purpurea
SapurV1A.1780s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold1780: 35504-40503 Salix purpurea
SapurV1A.1780s0050 10.0kb upstream 10.0kb upstream 7094 true Scaffold1780: 40504-47597 Salix purpurea
SapurV1A.1780s0050 10.0kb upstream 10.0kb upstream 11 false Scaffold1780: 47587-47597 Salix purpurea
SapurV1A.1780s0050 10.0kb downstream 10.0kb downstream 17083 true Scaffold1780: 30504-47586 Salix purpurea
SapurV1A.1780s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold1780: 30504-40503 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451603 5262 Malpighiales View MSA
124240162 5268 Malvidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain