Gene : SapurV1A.1821s0030 S. purpurea v1.0

Defline:  (1 of 6) PTHR12565//PTHR12565:SF82 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3
Name:  ? SapurV1A.1821s0030 Secondary Identifier:  ? PAC:31407113

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1821s0030 0.5kb upstream 0.5kb upstream 4770 true Scaffold1821: 40285-45054 Salix purpurea
SapurV1A.1821s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1821: 40285-40784 Salix purpurea
SapurV1A.1821s0030 0.5kb downstream 0.5kb downstream 4679 true Scaffold1821: 40785-45463 Salix purpurea
SapurV1A.1821s0030 0.5kb downstream 0.5kb downstream 409 false Scaffold1821: 45055-45463 Salix purpurea
SapurV1A.1821s0030 1.0kb upstream 1.0kb upstream 5270 true Scaffold1821: 39785-45054 Salix purpurea
SapurV1A.1821s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1821: 39785-40784 Salix purpurea
SapurV1A.1821s0030 1.0kb downstream 1.0kb downstream 4679 true Scaffold1821: 40785-45463 Salix purpurea
SapurV1A.1821s0030 1.0kb downstream 1.0kb downstream 409 false Scaffold1821: 45055-45463 Salix purpurea
SapurV1A.1821s0030 2.0kb upstream 2.0kb upstream 6270 true Scaffold1821: 38785-45054 Salix purpurea
SapurV1A.1821s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1821: 38785-40784 Salix purpurea
SapurV1A.1821s0030 2.0kb downstream 2.0kb downstream 4679 true Scaffold1821: 40785-45463 Salix purpurea
SapurV1A.1821s0030 2.0kb downstream 2.0kb downstream 409 false Scaffold1821: 45055-45463 Salix purpurea
SapurV1A.1821s0030 5.0kb upstream 5.0kb upstream 9270 true Scaffold1821: 35785-45054 Salix purpurea
SapurV1A.1821s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1821: 35785-40784 Salix purpurea
SapurV1A.1821s0030 5.0kb downstream 5.0kb downstream 4679 true Scaffold1821: 40785-45463 Salix purpurea
SapurV1A.1821s0030 5.0kb downstream 5.0kb downstream 409 false Scaffold1821: 45055-45463 Salix purpurea
SapurV1A.1821s0030 10.0kb upstream 10.0kb upstream 14270 true Scaffold1821: 30785-45054 Salix purpurea
SapurV1A.1821s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1821: 30785-40784 Salix purpurea
SapurV1A.1821s0030 10.0kb downstream 10.0kb downstream 4679 true Scaffold1821: 40785-45463 Salix purpurea
SapurV1A.1821s0030 10.0kb downstream 10.0kb downstream 409 false Scaffold1821: 45055-45463 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427643 5262 Malpighiales View MSA
124246717 5268 Malvidae View MSA
123952096 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain