Gene : SapurV1A.1124s0110 S. purpurea v1.0
Defline:  (1 of 1) PTHR30373:SF2 - UPF0603 PROTEIN YGCG Genomic Order:  186
Name:  ? SapurV1A.1124s0110 Secondary Identifier:  ? PAC:31429547
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-5083 Salix purpurea pathologic  
Spurpurea PWY-6348 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1124s0110 0.5kb upstream 0.5kb upstream 2840 true chr05: 1562727-1565566 Salix purpurea
SapurV1A.1124s0110 0.5kb upstream 0.5kb upstream 500 false chr05: 1562727-1563226 Salix purpurea
SapurV1A.1124s0110 0.5kb downstream 0.5kb downstream 2840 true chr05: 1563227-1566066 Salix purpurea
SapurV1A.1124s0110 0.5kb downstream 0.5kb downstream 500 false chr05: 1565567-1566066 Salix purpurea
SapurV1A.1124s0110 1.0kb upstream 1.0kb upstream 3340 true chr05: 1562227-1565566 Salix purpurea
SapurV1A.1124s0110 1.0kb upstream 1.0kb upstream 1000 false chr05: 1562227-1563226 Salix purpurea
SapurV1A.1124s0110 1.0kb downstream 1.0kb downstream 3340 true chr05: 1563227-1566566 Salix purpurea
SapurV1A.1124s0110 1.0kb downstream 1.0kb downstream 1000 false chr05: 1565567-1566566 Salix purpurea
SapurV1A.1124s0110 2.0kb upstream 2.0kb upstream 4340 true chr05: 1561227-1565566 Salix purpurea
SapurV1A.1124s0110 2.0kb upstream 2.0kb upstream 2000 false chr05: 1561227-1563226 Salix purpurea
SapurV1A.1124s0110 2.0kb downstream 2.0kb downstream 4340 true chr05: 1563227-1567566 Salix purpurea
SapurV1A.1124s0110 2.0kb downstream 2.0kb downstream 2000 false chr05: 1565567-1567566 Salix purpurea
SapurV1A.1124s0110 5.0kb upstream 5.0kb upstream 7340 true chr05: 1558227-1565566 Salix purpurea
SapurV1A.1124s0110 5.0kb upstream 5.0kb upstream 5000 false chr05: 1558227-1563226 Salix purpurea
SapurV1A.1124s0110 5.0kb downstream 5.0kb downstream 7340 true chr05: 1563227-1570566 Salix purpurea
SapurV1A.1124s0110 5.0kb downstream 5.0kb downstream 5000 false chr05: 1565567-1570566 Salix purpurea
SapurV1A.1124s0110 10.0kb upstream 10.0kb upstream 12340 true chr05: 1553227-1565566 Salix purpurea
SapurV1A.1124s0110 10.0kb upstream 10.0kb upstream 10000 false chr05: 1553227-1563226 Salix purpurea
SapurV1A.1124s0110 10.0kb downstream 10.0kb downstream 12340 true chr05: 1563227-1575566 Salix purpurea
SapurV1A.1124s0110 10.0kb downstream 10.0kb downstream 10000 false chr05: 1565567-1575566 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453579 5262 Malpighiales View MSA
124243217 5268 Malvidae View MSA
124061871 5270 Rosid View MSA
123737495 5271 Pentapetalae View MSA
122787639 5272 Eudicot View MSA
122046154 5273 Angiosperm View MSA
121349050 5274 Embryophyte View MSA
123424307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain