Gene : SapurV1A.2871s0030 S. purpurea v1.0
Defline:  (1 of 14) PF13456 - Reverse transcriptase-like (RVT_3) Genomic Order:  3
Name:  ? SapurV1A.2871s0030 Secondary Identifier:  ? PAC:31443967
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2871s0030 0.5kb upstream 0.5kb upstream 1976 true Scaffold2871: 8824-10799 Salix purpurea
SapurV1A.2871s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold2871: 8824-9323 Salix purpurea
SapurV1A.2871s0030 0.5kb downstream 0.5kb downstream 1976 true Scaffold2871: 9324-11299 Salix purpurea
SapurV1A.2871s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold2871: 10800-11299 Salix purpurea
SapurV1A.2871s0030 1.0kb upstream 1.0kb upstream 2476 true Scaffold2871: 8324-10799 Salix purpurea
SapurV1A.2871s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold2871: 8324-9323 Salix purpurea
SapurV1A.2871s0030 1.0kb downstream 1.0kb downstream 2476 true Scaffold2871: 9324-11799 Salix purpurea
SapurV1A.2871s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold2871: 10800-11799 Salix purpurea
SapurV1A.2871s0030 2.0kb upstream 2.0kb upstream 3476 true Scaffold2871: 7324-10799 Salix purpurea
SapurV1A.2871s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold2871: 7324-9323 Salix purpurea
SapurV1A.2871s0030 2.0kb downstream 2.0kb downstream 3476 true Scaffold2871: 9324-12799 Salix purpurea
SapurV1A.2871s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold2871: 10800-12799 Salix purpurea
SapurV1A.2871s0030 5.0kb upstream 5.0kb upstream 6476 true Scaffold2871: 4324-10799 Salix purpurea
SapurV1A.2871s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold2871: 4324-9323 Salix purpurea
SapurV1A.2871s0030 5.0kb downstream 5.0kb downstream 6476 true Scaffold2871: 9324-15799 Salix purpurea
SapurV1A.2871s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold2871: 10800-15799 Salix purpurea
SapurV1A.2871s0030 10.0kb upstream 10.0kb upstream 10799 true Scaffold2871: 1-10799 Salix purpurea
SapurV1A.2871s0030 10.0kb upstream 10.0kb upstream 9323 false Scaffold2871: 1-9323 Salix purpurea
SapurV1A.2871s0030 10.0kb downstream 10.0kb downstream 10701 true Scaffold2871: 9324-20024 Salix purpurea
SapurV1A.2871s0030 10.0kb downstream 10.0kb downstream 9225 false Scaffold2871: 10800-20024 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464193 5262 Malpighiales View MSA
124248393 5268 Malvidae View MSA
123952252 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain