Gene : SapurV1A.2672s0010 S. purpurea v1.0

Defline:  (1 of 6) PF04690//PF09011 - YABBY protein (YABBY) // HMG-box domain (HMG_box_2) Genomic Order:  1
Name:  ? SapurV1A.2672s0010 Secondary Identifier:  ? PAC:31443240

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2672s0010 0.5kb upstream 0.5kb upstream 3256 true Scaffold2672: 17772-21027 Salix purpurea
SapurV1A.2672s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2672: 17772-18271 Salix purpurea
SapurV1A.2672s0010 0.5kb downstream 0.5kb downstream 3256 true Scaffold2672: 18272-21527 Salix purpurea
SapurV1A.2672s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold2672: 21028-21527 Salix purpurea
SapurV1A.2672s0010 1.0kb upstream 1.0kb upstream 3756 true Scaffold2672: 17272-21027 Salix purpurea
SapurV1A.2672s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2672: 17272-18271 Salix purpurea
SapurV1A.2672s0010 1.0kb downstream 1.0kb downstream 3756 true Scaffold2672: 18272-22027 Salix purpurea
SapurV1A.2672s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold2672: 21028-22027 Salix purpurea
SapurV1A.2672s0010 2.0kb upstream 2.0kb upstream 4756 true Scaffold2672: 16272-21027 Salix purpurea
SapurV1A.2672s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2672: 16272-18271 Salix purpurea
SapurV1A.2672s0010 2.0kb downstream 2.0kb downstream 4093 true Scaffold2672: 18272-22364 Salix purpurea
SapurV1A.2672s0010 2.0kb downstream 2.0kb downstream 1337 false Scaffold2672: 21028-22364 Salix purpurea
SapurV1A.2672s0010 5.0kb upstream 5.0kb upstream 7756 true Scaffold2672: 13272-21027 Salix purpurea
SapurV1A.2672s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2672: 13272-18271 Salix purpurea
SapurV1A.2672s0010 5.0kb downstream 5.0kb downstream 4093 true Scaffold2672: 18272-22364 Salix purpurea
SapurV1A.2672s0010 5.0kb downstream 5.0kb downstream 1337 false Scaffold2672: 21028-22364 Salix purpurea
SapurV1A.2672s0010 10.0kb upstream 10.0kb upstream 12756 true Scaffold2672: 8272-21027 Salix purpurea
SapurV1A.2672s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold2672: 8272-18271 Salix purpurea
SapurV1A.2672s0010 10.0kb downstream 10.0kb downstream 4093 true Scaffold2672: 18272-22364 Salix purpurea
SapurV1A.2672s0010 10.0kb downstream 10.0kb downstream 1337 false Scaffold2672: 21028-22364 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122463308 5262 Malpighiales View MSA
124246217 5268 Malvidae View MSA
124070800 5270 Rosid View MSA
123746841 5271 Pentapetalae View MSA
122797230 5272 Eudicot View MSA
122048465 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain