Gene : SapurV1A.2504s0010 S. purpurea v1.0

Defline:  (1 of 3) PTHR34056//PTHR34056:SF1 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRC8 Genomic Order:  1
Name:  ? SapurV1A.2504s0010 Secondary Identifier:  ? PAC:31402132

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2504s0010 0.5kb upstream 0.5kb upstream 2680 true Scaffold2504: 6582-9261 Salix purpurea
SapurV1A.2504s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2504: 6582-7081 Salix purpurea
SapurV1A.2504s0010 0.5kb downstream 0.5kb downstream 2680 true Scaffold2504: 7082-9761 Salix purpurea
SapurV1A.2504s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold2504: 9262-9761 Salix purpurea
SapurV1A.2504s0010 1.0kb upstream 1.0kb upstream 3180 true Scaffold2504: 6082-9261 Salix purpurea
SapurV1A.2504s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2504: 6082-7081 Salix purpurea
SapurV1A.2504s0010 1.0kb downstream 1.0kb downstream 3180 true Scaffold2504: 7082-10261 Salix purpurea
SapurV1A.2504s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold2504: 9262-10261 Salix purpurea
SapurV1A.2504s0010 2.0kb upstream 2.0kb upstream 4180 true Scaffold2504: 5082-9261 Salix purpurea
SapurV1A.2504s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2504: 5082-7081 Salix purpurea
SapurV1A.2504s0010 2.0kb downstream 2.0kb downstream 4180 true Scaffold2504: 7082-11261 Salix purpurea
SapurV1A.2504s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold2504: 9262-11261 Salix purpurea
SapurV1A.2504s0010 5.0kb upstream 5.0kb upstream 7180 true Scaffold2504: 2082-9261 Salix purpurea
SapurV1A.2504s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2504: 2082-7081 Salix purpurea
SapurV1A.2504s0010 5.0kb downstream 5.0kb downstream 7180 true Scaffold2504: 7082-14261 Salix purpurea
SapurV1A.2504s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold2504: 9262-14261 Salix purpurea
SapurV1A.2504s0010 10.0kb upstream 10.0kb upstream 9261 true Scaffold2504: 1-9261 Salix purpurea
SapurV1A.2504s0010 10.0kb upstream 10.0kb upstream 7081 false Scaffold2504: 1-7081 Salix purpurea
SapurV1A.2504s0010 10.0kb downstream 10.0kb downstream 12180 true Scaffold2504: 7082-19261 Salix purpurea
SapurV1A.2504s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold2504: 9262-19261 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427014 5262 Malpighiales View MSA
124243623 5268 Malvidae View MSA
124067453 5270 Rosid View MSA
123740304 5271 Pentapetalae View MSA
122789532 5272 Eudicot View MSA
122043438 5273 Angiosperm View MSA
121310125 5274 Embryophyte View MSA
123347699 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain