Gene : SapurV1A.2458s0020 S. purpurea v1.0

Defline:  (1 of 4) PTHR24128//PTHR24128:SF14 - FAMILY NOT NAMED // E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED Genomic Order:  2
Name:  ? SapurV1A.2458s0020 Secondary Identifier:  ? PAC:31443223

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2458s0020 0.5kb upstream 0.5kb upstream 4015 true Scaffold2458: 18650-22664 Salix purpurea
SapurV1A.2458s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2458: 22165-22664 Salix purpurea
SapurV1A.2458s0020 0.5kb downstream 0.5kb downstream 4015 true Scaffold2458: 18150-22164 Salix purpurea
SapurV1A.2458s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2458: 18150-18649 Salix purpurea
SapurV1A.2458s0020 1.0kb upstream 1.0kb upstream 4515 true Scaffold2458: 18650-23164 Salix purpurea
SapurV1A.2458s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2458: 22165-23164 Salix purpurea
SapurV1A.2458s0020 1.0kb downstream 1.0kb downstream 4515 true Scaffold2458: 17650-22164 Salix purpurea
SapurV1A.2458s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2458: 17650-18649 Salix purpurea
SapurV1A.2458s0020 2.0kb upstream 2.0kb upstream 5515 true Scaffold2458: 18650-24164 Salix purpurea
SapurV1A.2458s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold2458: 22165-24164 Salix purpurea
SapurV1A.2458s0020 2.0kb downstream 2.0kb downstream 5515 true Scaffold2458: 16650-22164 Salix purpurea
SapurV1A.2458s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2458: 16650-18649 Salix purpurea
SapurV1A.2458s0020 5.0kb upstream 5.0kb upstream 7265 true Scaffold2458: 18650-25914 Salix purpurea
SapurV1A.2458s0020 5.0kb upstream 5.0kb upstream 3750 false Scaffold2458: 22165-25914 Salix purpurea
SapurV1A.2458s0020 5.0kb downstream 5.0kb downstream 8515 true Scaffold2458: 13650-22164 Salix purpurea
SapurV1A.2458s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold2458: 13650-18649 Salix purpurea
SapurV1A.2458s0020 10.0kb upstream 10.0kb upstream 7265 true Scaffold2458: 18650-25914 Salix purpurea
SapurV1A.2458s0020 10.0kb upstream 10.0kb upstream 3750 false Scaffold2458: 22165-25914 Salix purpurea
SapurV1A.2458s0020 10.0kb downstream 10.0kb downstream 13515 true Scaffold2458: 8650-22164 Salix purpurea
SapurV1A.2458s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold2458: 8650-18649 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461369 5262 Malpighiales View MSA
124253470 5268 Malvidae View MSA
124067649 5270 Rosid View MSA
123746800 5271 Pentapetalae View MSA
122791790 5272 Eudicot View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain