Gene : SapurV1A.4843s0010 S. purpurea v1.0

Defline:  (1 of 3) K02725 - 20S proteasome subunit alpha 6 (PSMA1) Genomic Order:  1
Name:  ? SapurV1A.4843s0010 Secondary Identifier:  ? PAC:31406943

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.4843s0010 0.5kb upstream 0.5kb upstream 3135 true Scaffold4843: 2767-5901 Salix purpurea
SapurV1A.4843s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold4843: 5402-5901 Salix purpurea
SapurV1A.4843s0010 0.5kb downstream 0.5kb downstream 3135 true Scaffold4843: 2267-5401 Salix purpurea
SapurV1A.4843s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold4843: 2267-2766 Salix purpurea
SapurV1A.4843s0010 1.0kb upstream 1.0kb upstream 3635 true Scaffold4843: 2767-6401 Salix purpurea
SapurV1A.4843s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold4843: 5402-6401 Salix purpurea
SapurV1A.4843s0010 1.0kb downstream 1.0kb downstream 3635 true Scaffold4843: 1767-5401 Salix purpurea
SapurV1A.4843s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold4843: 1767-2766 Salix purpurea
SapurV1A.4843s0010 2.0kb upstream 2.0kb upstream 4635 true Scaffold4843: 2767-7401 Salix purpurea
SapurV1A.4843s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold4843: 5402-7401 Salix purpurea
SapurV1A.4843s0010 2.0kb downstream 2.0kb downstream 4635 true Scaffold4843: 767-5401 Salix purpurea
SapurV1A.4843s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold4843: 767-2766 Salix purpurea
SapurV1A.4843s0010 5.0kb upstream 5.0kb upstream 4636 true Scaffold4843: 2767-7402 Salix purpurea
SapurV1A.4843s0010 5.0kb upstream 5.0kb upstream 2001 false Scaffold4843: 5402-7402 Salix purpurea
SapurV1A.4843s0010 5.0kb downstream 5.0kb downstream 5401 true Scaffold4843: 1-5401 Salix purpurea
SapurV1A.4843s0010 5.0kb downstream 5.0kb downstream 2766 false Scaffold4843: 1-2766 Salix purpurea
SapurV1A.4843s0010 10.0kb upstream 10.0kb upstream 4636 true Scaffold4843: 2767-7402 Salix purpurea
SapurV1A.4843s0010 10.0kb upstream 10.0kb upstream 2001 false Scaffold4843: 5402-7402 Salix purpurea
SapurV1A.4843s0010 10.0kb downstream 10.0kb downstream 5401 true Scaffold4843: 1-5401 Salix purpurea
SapurV1A.4843s0010 10.0kb downstream 10.0kb downstream 2766 false Scaffold4843: 1-2766 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122462200 5262 Malpighiales View MSA
124251312 5268 Malvidae View MSA
124065992 5270 Rosid View MSA
123739295 5271 Pentapetalae View MSA
122791097 5272 Eudicot View MSA
122046892 5273 Angiosperm View MSA
121347001 5274 Embryophyte View MSA
123424863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain