Gene : SapurV1A.5108s0010 S. purpurea v1.0
Defline:  (1 of 2) PTHR11538//PTHR11538:SF41 - PHENYLALANYL-TRNA SYNTHETASE // PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  1
Name:  ? SapurV1A.5108s0010 Secondary Identifier:  ? PAC:31412558
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea TRNA-CHARGING-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.5108s0010 0.5kb upstream 0.5kb upstream 3824 true Scaffold5108: 1-3824 Salix purpurea
SapurV1A.5108s0010 0.5kb upstream 0.5kb upstream 13 false Scaffold5108: 1-13 Salix purpurea
SapurV1A.5108s0010 0.5kb downstream 0.5kb downstream 4311 true Scaffold5108: 14-4324 Salix purpurea
SapurV1A.5108s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold5108: 3825-4324 Salix purpurea
SapurV1A.5108s0010 1.0kb upstream 1.0kb upstream 3824 true Scaffold5108: 1-3824 Salix purpurea
SapurV1A.5108s0010 1.0kb upstream 1.0kb upstream 13 false Scaffold5108: 1-13 Salix purpurea
SapurV1A.5108s0010 1.0kb downstream 1.0kb downstream 4811 true Scaffold5108: 14-4824 Salix purpurea
SapurV1A.5108s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold5108: 3825-4824 Salix purpurea
SapurV1A.5108s0010 2.0kb upstream 2.0kb upstream 3824 true Scaffold5108: 1-3824 Salix purpurea
SapurV1A.5108s0010 2.0kb upstream 2.0kb upstream 13 false Scaffold5108: 1-13 Salix purpurea
SapurV1A.5108s0010 2.0kb downstream 2.0kb downstream 5811 true Scaffold5108: 14-5824 Salix purpurea
SapurV1A.5108s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold5108: 3825-5824 Salix purpurea
SapurV1A.5108s0010 5.0kb upstream 5.0kb upstream 3824 true Scaffold5108: 1-3824 Salix purpurea
SapurV1A.5108s0010 5.0kb upstream 5.0kb upstream 13 false Scaffold5108: 1-13 Salix purpurea
SapurV1A.5108s0010 5.0kb downstream 5.0kb downstream 6651 true Scaffold5108: 14-6664 Salix purpurea
SapurV1A.5108s0010 5.0kb downstream 5.0kb downstream 2840 false Scaffold5108: 3825-6664 Salix purpurea
SapurV1A.5108s0010 10.0kb upstream 10.0kb upstream 3824 true Scaffold5108: 1-3824 Salix purpurea
SapurV1A.5108s0010 10.0kb upstream 10.0kb upstream 13 false Scaffold5108: 1-13 Salix purpurea
SapurV1A.5108s0010 10.0kb downstream 10.0kb downstream 6651 true Scaffold5108: 14-6664 Salix purpurea
SapurV1A.5108s0010 10.0kb downstream 10.0kb downstream 2840 false Scaffold5108: 3825-6664 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121673440 5273 Angiosperm View MSA
122406114 5262 Malpighiales Singleton cluster - no MSA
124201722 5268 Malvidae Singleton cluster - no MSA
124075362 5270 Rosid View MSA
123628837 5271 Pentapetalae View MSA
122663078 5272 Eudicot View MSA
120945322 5274 Embryophyte View MSA
122985706 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain