Gene : SapurV1A.4120s0010 S. purpurea v1.0
Defline:  (1 of 6) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  1
Name:  ? SapurV1A.4120s0010 Secondary Identifier:  ? PAC:31426559
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea CAROTENOID-PWY Salix purpurea pathologic  
Spurpurea PWY-6475 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.4120s0010 0.5kb upstream 0.5kb upstream 3351 true Scaffold4120: 5504-8854 Salix purpurea
SapurV1A.4120s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold4120: 5504-6003 Salix purpurea
SapurV1A.4120s0010 0.5kb downstream 0.5kb downstream 3351 true Scaffold4120: 6004-9354 Salix purpurea
SapurV1A.4120s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold4120: 8855-9354 Salix purpurea
SapurV1A.4120s0010 1.0kb upstream 1.0kb upstream 3851 true Scaffold4120: 5004-8854 Salix purpurea
SapurV1A.4120s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold4120: 5004-6003 Salix purpurea
SapurV1A.4120s0010 1.0kb downstream 1.0kb downstream 3851 true Scaffold4120: 6004-9854 Salix purpurea
SapurV1A.4120s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold4120: 8855-9854 Salix purpurea
SapurV1A.4120s0010 2.0kb upstream 2.0kb upstream 4851 true Scaffold4120: 4004-8854 Salix purpurea
SapurV1A.4120s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold4120: 4004-6003 Salix purpurea
SapurV1A.4120s0010 2.0kb downstream 2.0kb downstream 4647 true Scaffold4120: 6004-10650 Salix purpurea
SapurV1A.4120s0010 2.0kb downstream 2.0kb downstream 1796 false Scaffold4120: 8855-10650 Salix purpurea
SapurV1A.4120s0010 5.0kb upstream 5.0kb upstream 7851 true Scaffold4120: 1004-8854 Salix purpurea
SapurV1A.4120s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold4120: 1004-6003 Salix purpurea
SapurV1A.4120s0010 5.0kb downstream 5.0kb downstream 4647 true Scaffold4120: 6004-10650 Salix purpurea
SapurV1A.4120s0010 5.0kb downstream 5.0kb downstream 1796 false Scaffold4120: 8855-10650 Salix purpurea
SapurV1A.4120s0010 10.0kb upstream 10.0kb upstream 8854 true Scaffold4120: 1-8854 Salix purpurea
SapurV1A.4120s0010 10.0kb upstream 10.0kb upstream 6003 false Scaffold4120: 1-6003 Salix purpurea
SapurV1A.4120s0010 10.0kb downstream 10.0kb downstream 4647 true Scaffold4120: 6004-10650 Salix purpurea
SapurV1A.4120s0010 10.0kb downstream 10.0kb downstream 1796 false Scaffold4120: 8855-10650 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122463216 5262 Malpighiales View MSA
124251202 5268 Malvidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain