Gene : SapurV1A.3969s0010 S. purpurea v1.0
Defline:  (1 of 8) K00021 - hydroxymethylglutaryl-CoA reductase (NADPH) (HMGCR) Genomic Order:  1
Name:  ? SapurV1A.3969s0010 Secondary Identifier:  ? PAC:31419535
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-5910 Salix purpurea pathologic  
Spurpurea PWY-922 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.3969s0010 0.5kb upstream 0.5kb upstream 3057 true Scaffold3969: 7070-10126 Salix purpurea
SapurV1A.3969s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold3969: 9627-10126 Salix purpurea
SapurV1A.3969s0010 0.5kb downstream 0.5kb downstream 3057 true Scaffold3969: 6570-9626 Salix purpurea
SapurV1A.3969s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold3969: 6570-7069 Salix purpurea
SapurV1A.3969s0010 1.0kb upstream 1.0kb upstream 3557 true Scaffold3969: 7070-10626 Salix purpurea
SapurV1A.3969s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold3969: 9627-10626 Salix purpurea
SapurV1A.3969s0010 1.0kb downstream 1.0kb downstream 3557 true Scaffold3969: 6070-9626 Salix purpurea
SapurV1A.3969s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold3969: 6070-7069 Salix purpurea
SapurV1A.3969s0010 2.0kb upstream 2.0kb upstream 4190 true Scaffold3969: 7070-11259 Salix purpurea
SapurV1A.3969s0010 2.0kb upstream 2.0kb upstream 1633 false Scaffold3969: 9627-11259 Salix purpurea
SapurV1A.3969s0010 2.0kb downstream 2.0kb downstream 4557 true Scaffold3969: 5070-9626 Salix purpurea
SapurV1A.3969s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold3969: 5070-7069 Salix purpurea
SapurV1A.3969s0010 5.0kb upstream 5.0kb upstream 4190 true Scaffold3969: 7070-11259 Salix purpurea
SapurV1A.3969s0010 5.0kb upstream 5.0kb upstream 1633 false Scaffold3969: 9627-11259 Salix purpurea
SapurV1A.3969s0010 5.0kb downstream 5.0kb downstream 7557 true Scaffold3969: 2070-9626 Salix purpurea
SapurV1A.3969s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold3969: 2070-7069 Salix purpurea
SapurV1A.3969s0010 10.0kb upstream 10.0kb upstream 4190 true Scaffold3969: 7070-11259 Salix purpurea
SapurV1A.3969s0010 10.0kb upstream 10.0kb upstream 1633 false Scaffold3969: 9627-11259 Salix purpurea
SapurV1A.3969s0010 10.0kb downstream 10.0kb downstream 9626 true Scaffold3969: 1-9626 Salix purpurea
SapurV1A.3969s0010 10.0kb downstream 10.0kb downstream 7069 false Scaffold3969: 1-7069 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122463299 5262 Malpighiales View MSA
124239533 5268 Malvidae View MSA
124072826 5270 Rosid View MSA
123751436 5271 Pentapetalae View MSA
122791870 5272 Eudicot View MSA
122051392 5273 Angiosperm View MSA
121350752 5274 Embryophyte View MSA
123381875 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain