Gene : SapurV1A.3690s0010 S. purpurea v1.0
Defline:  (1 of 2) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  1
Name:  ? SapurV1A.3690s0010 Secondary Identifier:  ? PAC:31402217
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea BRANCHED-CHAIN-AA-SYN-PWY Salix purpurea pathologic  
Spurpurea ILEUSYN-PWY Salix purpurea pathologic  
Spurpurea PWY-3001 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.3690s0010 0.5kb upstream 0.5kb upstream 3632 true Scaffold3690: 5724-9355 Salix purpurea
SapurV1A.3690s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold3690: 5724-6223 Salix purpurea
SapurV1A.3690s0010 0.5kb downstream 0.5kb downstream 3632 true Scaffold3690: 6224-9855 Salix purpurea
SapurV1A.3690s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold3690: 9356-9855 Salix purpurea
SapurV1A.3690s0010 1.0kb upstream 1.0kb upstream 4132 true Scaffold3690: 5224-9355 Salix purpurea
SapurV1A.3690s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold3690: 5224-6223 Salix purpurea
SapurV1A.3690s0010 1.0kb downstream 1.0kb downstream 4132 true Scaffold3690: 6224-10355 Salix purpurea
SapurV1A.3690s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold3690: 9356-10355 Salix purpurea
SapurV1A.3690s0010 2.0kb upstream 2.0kb upstream 5132 true Scaffold3690: 4224-9355 Salix purpurea
SapurV1A.3690s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold3690: 4224-6223 Salix purpurea
SapurV1A.3690s0010 2.0kb downstream 2.0kb downstream 5132 true Scaffold3690: 6224-11355 Salix purpurea
SapurV1A.3690s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold3690: 9356-11355 Salix purpurea
SapurV1A.3690s0010 5.0kb upstream 5.0kb upstream 8132 true Scaffold3690: 1224-9355 Salix purpurea
SapurV1A.3690s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold3690: 1224-6223 Salix purpurea
SapurV1A.3690s0010 5.0kb downstream 5.0kb downstream 6287 true Scaffold3690: 6224-12510 Salix purpurea
SapurV1A.3690s0010 5.0kb downstream 5.0kb downstream 3155 false Scaffold3690: 9356-12510 Salix purpurea
SapurV1A.3690s0010 10.0kb upstream 10.0kb upstream 9355 true Scaffold3690: 1-9355 Salix purpurea
SapurV1A.3690s0010 10.0kb upstream 10.0kb upstream 6223 false Scaffold3690: 1-6223 Salix purpurea
SapurV1A.3690s0010 10.0kb downstream 10.0kb downstream 6287 true Scaffold3690: 6224-12510 Salix purpurea
SapurV1A.3690s0010 10.0kb downstream 10.0kb downstream 3155 false Scaffold3690: 9356-12510 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791912 5273 Angiosperm View MSA
122405183 5262 Malpighiales Singleton cluster - no MSA
124200904 5268 Malvidae Singleton cluster - no MSA
123920594 5270 Rosid Singleton cluster - no MSA
123744815 5271 Pentapetalae View MSA
122795262 5272 Eudicot View MSA
121063181 5274 Embryophyte View MSA
123427574 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain