Gene : SapurV1A.0001s0590 S. purpurea v1.0
Defline:  (1 of 4) PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Genomic Order:  853
Name:  ? SapurV1A.0001s0590 Secondary Identifier:  ? PAC:31411571
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-7511 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0001s0590 0.5kb upstream 0.5kb upstream 5681 true chr06: 7160859-7166539 Salix purpurea
SapurV1A.0001s0590 0.5kb upstream 0.5kb upstream 500 false chr06: 7160859-7161358 Salix purpurea
SapurV1A.0001s0590 0.5kb downstream 0.5kb downstream 5681 true chr06: 7161359-7167039 Salix purpurea
SapurV1A.0001s0590 0.5kb downstream 0.5kb downstream 500 false chr06: 7166540-7167039 Salix purpurea
SapurV1A.0001s0590 1.0kb upstream 1.0kb upstream 6181 true chr06: 7160359-7166539 Salix purpurea
SapurV1A.0001s0590 1.0kb upstream 1.0kb upstream 1000 false chr06: 7160359-7161358 Salix purpurea
SapurV1A.0001s0590 1.0kb downstream 1.0kb downstream 6181 true chr06: 7161359-7167539 Salix purpurea
SapurV1A.0001s0590 1.0kb downstream 1.0kb downstream 1000 false chr06: 7166540-7167539 Salix purpurea
SapurV1A.0001s0590 2.0kb upstream 2.0kb upstream 7181 true chr06: 7159359-7166539 Salix purpurea
SapurV1A.0001s0590 2.0kb upstream 2.0kb upstream 2000 false chr06: 7159359-7161358 Salix purpurea
SapurV1A.0001s0590 2.0kb downstream 2.0kb downstream 7181 true chr06: 7161359-7168539 Salix purpurea
SapurV1A.0001s0590 2.0kb downstream 2.0kb downstream 2000 false chr06: 7166540-7168539 Salix purpurea
SapurV1A.0001s0590 5.0kb upstream 5.0kb upstream 10181 true chr06: 7156359-7166539 Salix purpurea
SapurV1A.0001s0590 5.0kb upstream 5.0kb upstream 5000 false chr06: 7156359-7161358 Salix purpurea
SapurV1A.0001s0590 5.0kb downstream 5.0kb downstream 10181 true chr06: 7161359-7171539 Salix purpurea
SapurV1A.0001s0590 5.0kb downstream 5.0kb downstream 5000 false chr06: 7166540-7171539 Salix purpurea
SapurV1A.0001s0590 10.0kb upstream 10.0kb upstream 15181 true chr06: 7151359-7166539 Salix purpurea
SapurV1A.0001s0590 10.0kb upstream 10.0kb upstream 10000 false chr06: 7151359-7161358 Salix purpurea
SapurV1A.0001s0590 10.0kb downstream 10.0kb downstream 15181 true chr06: 7161359-7176539 Salix purpurea
SapurV1A.0001s0590 10.0kb downstream 10.0kb downstream 10000 false chr06: 7166540-7176539 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122792833 5272 Eudicot View MSA
122464700 5262 Malpighiales View MSA
124250832 5268 Malvidae View MSA
124070780 5270 Rosid View MSA
123741557 5271 Pentapetalae View MSA
122042274 5273 Angiosperm View MSA
121349312 5274 Embryophyte View MSA
123381271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain