Gene : SapurV1A.0001s1820 S. purpurea v1.0
Defline:  (1 of 1) PTHR22594//PTHR22594:SF33 - ASPARTYL/LYSYL-TRNA SYNTHETASE // ASPARTATE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  730
Name:  ? SapurV1A.0001s1820 Secondary Identifier:  ? PAC:31411009
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea TRNA-CHARGING-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0001s1820 0.5kb upstream 0.5kb upstream 5477 true chr06: 6246896-6252372 Salix purpurea
SapurV1A.0001s1820 0.5kb upstream 0.5kb upstream 500 false chr06: 6246896-6247395 Salix purpurea
SapurV1A.0001s1820 0.5kb downstream 0.5kb downstream 5477 true chr06: 6247396-6252872 Salix purpurea
SapurV1A.0001s1820 0.5kb downstream 0.5kb downstream 500 false chr06: 6252373-6252872 Salix purpurea
SapurV1A.0001s1820 1.0kb upstream 1.0kb upstream 5977 true chr06: 6246396-6252372 Salix purpurea
SapurV1A.0001s1820 1.0kb upstream 1.0kb upstream 1000 false chr06: 6246396-6247395 Salix purpurea
SapurV1A.0001s1820 1.0kb downstream 1.0kb downstream 5977 true chr06: 6247396-6253372 Salix purpurea
SapurV1A.0001s1820 1.0kb downstream 1.0kb downstream 1000 false chr06: 6252373-6253372 Salix purpurea
SapurV1A.0001s1820 2.0kb upstream 2.0kb upstream 6977 true chr06: 6245396-6252372 Salix purpurea
SapurV1A.0001s1820 2.0kb upstream 2.0kb upstream 2000 false chr06: 6245396-6247395 Salix purpurea
SapurV1A.0001s1820 2.0kb downstream 2.0kb downstream 6977 true chr06: 6247396-6254372 Salix purpurea
SapurV1A.0001s1820 2.0kb downstream 2.0kb downstream 2000 false chr06: 6252373-6254372 Salix purpurea
SapurV1A.0001s1820 5.0kb upstream 5.0kb upstream 9977 true chr06: 6242396-6252372 Salix purpurea
SapurV1A.0001s1820 5.0kb upstream 5.0kb upstream 5000 false chr06: 6242396-6247395 Salix purpurea
SapurV1A.0001s1820 5.0kb downstream 5.0kb downstream 9977 true chr06: 6247396-6257372 Salix purpurea
SapurV1A.0001s1820 5.0kb downstream 5.0kb downstream 5000 false chr06: 6252373-6257372 Salix purpurea
SapurV1A.0001s1820 10.0kb upstream 10.0kb upstream 14977 true chr06: 6237396-6252372 Salix purpurea
SapurV1A.0001s1820 10.0kb upstream 10.0kb upstream 10000 false chr06: 6237396-6247395 Salix purpurea
SapurV1A.0001s1820 10.0kb downstream 10.0kb downstream 14977 true chr06: 6247396-6262372 Salix purpurea
SapurV1A.0001s1820 10.0kb downstream 10.0kb downstream 10000 false chr06: 6252373-6262372 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451821 5262 Malpighiales View MSA
124240572 5268 Malvidae View MSA
124066804 5270 Rosid View MSA
123746132 5271 Pentapetalae View MSA
122792438 5272 Eudicot View MSA
122047949 5273 Angiosperm View MSA
121349506 5274 Embryophyte View MSA
123428007 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain