Gene : SapurV1A.0108s0140 S. purpurea v1.0
Defline:  (1 of 1) 5.5.1.18 - Lycopene epsilon-cyclase Genomic Order:  1261
Name:  ? SapurV1A.0108s0140 Secondary Identifier:  ? PAC:31409984
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea CAROTENOID-PWY Salix purpurea pathologic  
Spurpurea PWY-5175 Salix purpurea pathologic  
Spurpurea PWY-5946 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0108s0140 0.5kb upstream 0.5kb upstream 10275 true chr06: 13482218-13492492 Salix purpurea
SapurV1A.0108s0140 0.5kb upstream 0.5kb upstream 500 false chr06: 13491993-13492492 Salix purpurea
SapurV1A.0108s0140 0.5kb downstream 0.5kb downstream 10275 true chr06: 13481718-13491992 Salix purpurea
SapurV1A.0108s0140 0.5kb downstream 0.5kb downstream 500 false chr06: 13481718-13482217 Salix purpurea
SapurV1A.0108s0140 1.0kb upstream 1.0kb upstream 10775 true chr06: 13482218-13492992 Salix purpurea
SapurV1A.0108s0140 1.0kb upstream 1.0kb upstream 1000 false chr06: 13491993-13492992 Salix purpurea
SapurV1A.0108s0140 1.0kb downstream 1.0kb downstream 10775 true chr06: 13481218-13491992 Salix purpurea
SapurV1A.0108s0140 1.0kb downstream 1.0kb downstream 1000 false chr06: 13481218-13482217 Salix purpurea
SapurV1A.0108s0140 2.0kb upstream 2.0kb upstream 11775 true chr06: 13482218-13493992 Salix purpurea
SapurV1A.0108s0140 2.0kb upstream 2.0kb upstream 2000 false chr06: 13491993-13493992 Salix purpurea
SapurV1A.0108s0140 2.0kb downstream 2.0kb downstream 11775 true chr06: 13480218-13491992 Salix purpurea
SapurV1A.0108s0140 2.0kb downstream 2.0kb downstream 2000 false chr06: 13480218-13482217 Salix purpurea
SapurV1A.0108s0140 5.0kb upstream 5.0kb upstream 14775 true chr06: 13482218-13496992 Salix purpurea
SapurV1A.0108s0140 5.0kb upstream 5.0kb upstream 5000 false chr06: 13491993-13496992 Salix purpurea
SapurV1A.0108s0140 5.0kb downstream 5.0kb downstream 14775 true chr06: 13477218-13491992 Salix purpurea
SapurV1A.0108s0140 5.0kb downstream 5.0kb downstream 5000 false chr06: 13477218-13482217 Salix purpurea
SapurV1A.0108s0140 10.0kb upstream 10.0kb upstream 19775 true chr06: 13482218-13501992 Salix purpurea
SapurV1A.0108s0140 10.0kb upstream 10.0kb upstream 10000 false chr06: 13491993-13501992 Salix purpurea
SapurV1A.0108s0140 10.0kb downstream 10.0kb downstream 19775 true chr06: 13472218-13491992 Salix purpurea
SapurV1A.0108s0140 10.0kb downstream 10.0kb downstream 10000 false chr06: 13472218-13482217 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458416 5262 Malpighiales View MSA
124243060 5268 Malvidae View MSA
124068333 5270 Rosid View MSA
123739919 5271 Pentapetalae View MSA
122791667 5272 Eudicot View MSA
122041543 5273 Angiosperm View MSA
121345455 5274 Embryophyte View MSA
123424108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain