Gene : SapurV1A.0141s0230 S. purpurea v1.0
Defline:  (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC Genomic Order:  1141
Name:  ? SapurV1A.0141s0230 Secondary Identifier:  ? PAC:31409589
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0141s0230 0.5kb upstream 0.5kb upstream 4893 true chr06: 12085404-12090296 Salix purpurea
SapurV1A.0141s0230 0.5kb upstream 0.5kb upstream 500 false chr06: 12085404-12085903 Salix purpurea
SapurV1A.0141s0230 0.5kb downstream 0.5kb downstream 4893 true chr06: 12085904-12090796 Salix purpurea
SapurV1A.0141s0230 0.5kb downstream 0.5kb downstream 500 false chr06: 12090297-12090796 Salix purpurea
SapurV1A.0141s0230 1.0kb upstream 1.0kb upstream 5393 true chr06: 12084904-12090296 Salix purpurea
SapurV1A.0141s0230 1.0kb upstream 1.0kb upstream 1000 false chr06: 12084904-12085903 Salix purpurea
SapurV1A.0141s0230 1.0kb downstream 1.0kb downstream 5393 true chr06: 12085904-12091296 Salix purpurea
SapurV1A.0141s0230 1.0kb downstream 1.0kb downstream 1000 false chr06: 12090297-12091296 Salix purpurea
SapurV1A.0141s0230 2.0kb upstream 2.0kb upstream 6393 true chr06: 12083904-12090296 Salix purpurea
SapurV1A.0141s0230 2.0kb upstream 2.0kb upstream 2000 false chr06: 12083904-12085903 Salix purpurea
SapurV1A.0141s0230 2.0kb downstream 2.0kb downstream 6393 true chr06: 12085904-12092296 Salix purpurea
SapurV1A.0141s0230 2.0kb downstream 2.0kb downstream 2000 false chr06: 12090297-12092296 Salix purpurea
SapurV1A.0141s0230 5.0kb upstream 5.0kb upstream 9393 true chr06: 12080904-12090296 Salix purpurea
SapurV1A.0141s0230 5.0kb upstream 5.0kb upstream 5000 false chr06: 12080904-12085903 Salix purpurea
SapurV1A.0141s0230 5.0kb downstream 5.0kb downstream 9393 true chr06: 12085904-12095296 Salix purpurea
SapurV1A.0141s0230 5.0kb downstream 5.0kb downstream 5000 false chr06: 12090297-12095296 Salix purpurea
SapurV1A.0141s0230 10.0kb upstream 10.0kb upstream 14393 true chr06: 12075904-12090296 Salix purpurea
SapurV1A.0141s0230 10.0kb upstream 10.0kb upstream 10000 false chr06: 12075904-12085903 Salix purpurea
SapurV1A.0141s0230 10.0kb downstream 10.0kb downstream 14393 true chr06: 12085904-12100296 Salix purpurea
SapurV1A.0141s0230 10.0kb downstream 10.0kb downstream 10000 false chr06: 12090297-12100296 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460988 5262 Malpighiales View MSA
124237250 5268 Malvidae View MSA
124065306 5270 Rosid View MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain