Gene : SapurV1A.0159s0040 S. purpurea v1.0
Defline:  (1 of 1) PTHR10277//PTHR10277:SF38 - HOMOCITRATE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  288
Name:  ? SapurV1A.0159s0040 Secondary Identifier:  ? PAC:31408759
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea LEU-DEG2-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0159s0040 0.5kb upstream 0.5kb upstream 6793 true chr06: 2052545-2059337 Salix purpurea
SapurV1A.0159s0040 0.5kb upstream 0.5kb upstream 500 false chr06: 2058838-2059337 Salix purpurea
SapurV1A.0159s0040 0.5kb downstream 0.5kb downstream 6793 true chr06: 2052045-2058837 Salix purpurea
SapurV1A.0159s0040 0.5kb downstream 0.5kb downstream 500 false chr06: 2052045-2052544 Salix purpurea
SapurV1A.0159s0040 1.0kb upstream 1.0kb upstream 7293 true chr06: 2052545-2059837 Salix purpurea
SapurV1A.0159s0040 1.0kb upstream 1.0kb upstream 1000 false chr06: 2058838-2059837 Salix purpurea
SapurV1A.0159s0040 1.0kb downstream 1.0kb downstream 7293 true chr06: 2051545-2058837 Salix purpurea
SapurV1A.0159s0040 1.0kb downstream 1.0kb downstream 1000 false chr06: 2051545-2052544 Salix purpurea
SapurV1A.0159s0040 2.0kb upstream 2.0kb upstream 8293 true chr06: 2052545-2060837 Salix purpurea
SapurV1A.0159s0040 2.0kb upstream 2.0kb upstream 2000 false chr06: 2058838-2060837 Salix purpurea
SapurV1A.0159s0040 2.0kb downstream 2.0kb downstream 8293 true chr06: 2050545-2058837 Salix purpurea
SapurV1A.0159s0040 2.0kb downstream 2.0kb downstream 2000 false chr06: 2050545-2052544 Salix purpurea
SapurV1A.0159s0040 5.0kb upstream 5.0kb upstream 11293 true chr06: 2052545-2063837 Salix purpurea
SapurV1A.0159s0040 5.0kb upstream 5.0kb upstream 5000 false chr06: 2058838-2063837 Salix purpurea
SapurV1A.0159s0040 5.0kb downstream 5.0kb downstream 11293 true chr06: 2047545-2058837 Salix purpurea
SapurV1A.0159s0040 5.0kb downstream 5.0kb downstream 5000 false chr06: 2047545-2052544 Salix purpurea
SapurV1A.0159s0040 10.0kb upstream 10.0kb upstream 16293 true chr06: 2052545-2068837 Salix purpurea
SapurV1A.0159s0040 10.0kb upstream 10.0kb upstream 10000 false chr06: 2058838-2068837 Salix purpurea
SapurV1A.0159s0040 10.0kb downstream 10.0kb downstream 16293 true chr06: 2042545-2058837 Salix purpurea
SapurV1A.0159s0040 10.0kb downstream 10.0kb downstream 10000 false chr06: 2042545-2052544 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461606 5262 Malpighiales View MSA
124245610 5268 Malvidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain