Gene : SapurV1A.1230s0030 S. purpurea v1.0
Defline:  (1 of 3) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase Genomic Order:  1114
Name:  ? SapurV1A.1230s0030 Secondary Identifier:  ? PAC:31411792
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea TRNA-CHARGING-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1230s0030 0.5kb upstream 0.5kb upstream 5809 true chr06: 11767876-11773684 Salix purpurea
SapurV1A.1230s0030 0.5kb upstream 0.5kb upstream 500 false chr06: 11767876-11768375 Salix purpurea
SapurV1A.1230s0030 0.5kb downstream 0.5kb downstream 5809 true chr06: 11768376-11774184 Salix purpurea
SapurV1A.1230s0030 0.5kb downstream 0.5kb downstream 500 false chr06: 11773685-11774184 Salix purpurea
SapurV1A.1230s0030 1.0kb upstream 1.0kb upstream 6309 true chr06: 11767376-11773684 Salix purpurea
SapurV1A.1230s0030 1.0kb upstream 1.0kb upstream 1000 false chr06: 11767376-11768375 Salix purpurea
SapurV1A.1230s0030 1.0kb downstream 1.0kb downstream 6309 true chr06: 11768376-11774684 Salix purpurea
SapurV1A.1230s0030 1.0kb downstream 1.0kb downstream 1000 false chr06: 11773685-11774684 Salix purpurea
SapurV1A.1230s0030 2.0kb upstream 2.0kb upstream 7309 true chr06: 11766376-11773684 Salix purpurea
SapurV1A.1230s0030 2.0kb upstream 2.0kb upstream 2000 false chr06: 11766376-11768375 Salix purpurea
SapurV1A.1230s0030 2.0kb downstream 2.0kb downstream 7309 true chr06: 11768376-11775684 Salix purpurea
SapurV1A.1230s0030 2.0kb downstream 2.0kb downstream 2000 false chr06: 11773685-11775684 Salix purpurea
SapurV1A.1230s0030 5.0kb upstream 5.0kb upstream 10309 true chr06: 11763376-11773684 Salix purpurea
SapurV1A.1230s0030 5.0kb upstream 5.0kb upstream 5000 false chr06: 11763376-11768375 Salix purpurea
SapurV1A.1230s0030 5.0kb downstream 5.0kb downstream 10309 true chr06: 11768376-11778684 Salix purpurea
SapurV1A.1230s0030 5.0kb downstream 5.0kb downstream 5000 false chr06: 11773685-11778684 Salix purpurea
SapurV1A.1230s0030 10.0kb upstream 10.0kb upstream 15309 true chr06: 11758376-11773684 Salix purpurea
SapurV1A.1230s0030 10.0kb upstream 10.0kb upstream 10000 false chr06: 11758376-11768375 Salix purpurea
SapurV1A.1230s0030 10.0kb downstream 10.0kb downstream 15309 true chr06: 11768376-11783684 Salix purpurea
SapurV1A.1230s0030 10.0kb downstream 10.0kb downstream 10000 false chr06: 11773685-11783684 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458189 5262 Malpighiales View MSA
124242032 5268 Malvidae View MSA
124069172 5270 Rosid View MSA
123739559 5271 Pentapetalae View MSA
122792579 5272 Eudicot View MSA
122042038 5273 Angiosperm View MSA
121344697 5274 Embryophyte View MSA
123424484 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain