Gene : SapurV1A.0200s0260 S. purpurea v1.0
Defline:  (1 of 1) PTHR11451:SF5 - THREONINE--TRNA LIGASE 1, CYTOPLASMIC-RELATED Genomic Order:  1266
Name:  ? SapurV1A.0200s0260 Secondary Identifier:  ? PAC:31417299
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea TRNA-CHARGING-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0200s0260 0.5kb upstream 0.5kb upstream 11119 true chr08: 10161878-10172996 Salix purpurea
SapurV1A.0200s0260 0.5kb upstream 0.5kb upstream 500 false chr08: 10161878-10162377 Salix purpurea
SapurV1A.0200s0260 0.5kb downstream 0.5kb downstream 11119 true chr08: 10162378-10173496 Salix purpurea
SapurV1A.0200s0260 0.5kb downstream 0.5kb downstream 500 false chr08: 10172997-10173496 Salix purpurea
SapurV1A.0200s0260 1.0kb upstream 1.0kb upstream 11619 true chr08: 10161378-10172996 Salix purpurea
SapurV1A.0200s0260 1.0kb upstream 1.0kb upstream 1000 false chr08: 10161378-10162377 Salix purpurea
SapurV1A.0200s0260 1.0kb downstream 1.0kb downstream 11619 true chr08: 10162378-10173996 Salix purpurea
SapurV1A.0200s0260 1.0kb downstream 1.0kb downstream 1000 false chr08: 10172997-10173996 Salix purpurea
SapurV1A.0200s0260 2.0kb upstream 2.0kb upstream 12619 true chr08: 10160378-10172996 Salix purpurea
SapurV1A.0200s0260 2.0kb upstream 2.0kb upstream 2000 false chr08: 10160378-10162377 Salix purpurea
SapurV1A.0200s0260 2.0kb downstream 2.0kb downstream 12619 true chr08: 10162378-10174996 Salix purpurea
SapurV1A.0200s0260 2.0kb downstream 2.0kb downstream 2000 false chr08: 10172997-10174996 Salix purpurea
SapurV1A.0200s0260 5.0kb upstream 5.0kb upstream 15619 true chr08: 10157378-10172996 Salix purpurea
SapurV1A.0200s0260 5.0kb upstream 5.0kb upstream 5000 false chr08: 10157378-10162377 Salix purpurea
SapurV1A.0200s0260 5.0kb downstream 5.0kb downstream 15619 true chr08: 10162378-10177996 Salix purpurea
SapurV1A.0200s0260 5.0kb downstream 5.0kb downstream 5000 false chr08: 10172997-10177996 Salix purpurea
SapurV1A.0200s0260 10.0kb upstream 10.0kb upstream 20619 true chr08: 10152378-10172996 Salix purpurea
SapurV1A.0200s0260 10.0kb upstream 10.0kb upstream 10000 false chr08: 10152378-10162377 Salix purpurea
SapurV1A.0200s0260 10.0kb downstream 10.0kb downstream 20619 true chr08: 10162378-10182996 Salix purpurea
SapurV1A.0200s0260 10.0kb downstream 10.0kb downstream 10000 false chr08: 10172997-10182996 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453069 5262 Malpighiales View MSA
124249574 5268 Malvidae View MSA
124061778 5270 Rosid View MSA
123740183 5271 Pentapetalae View MSA
122787371 5272 Eudicot View MSA
122045647 5273 Angiosperm View MSA
123429084 5275 Viridiplantae View MSA
121345438 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain