Gene : SapurV1A.0411s0230 S. purpurea v1.0
Defline:  (1 of 2) PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Genomic Order:  301
Name:  ? SapurV1A.0411s0230 Secondary Identifier:  ? PAC:31417542
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-6441 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0411s0230 0.5kb upstream 0.5kb upstream 4205 true chr08: 1889106-1893310 Salix purpurea
SapurV1A.0411s0230 0.5kb upstream 0.5kb upstream 500 false chr08: 1892811-1893310 Salix purpurea
SapurV1A.0411s0230 0.5kb downstream 0.5kb downstream 4205 true chr08: 1888606-1892810 Salix purpurea
SapurV1A.0411s0230 0.5kb downstream 0.5kb downstream 500 false chr08: 1888606-1889105 Salix purpurea
SapurV1A.0411s0230 1.0kb upstream 1.0kb upstream 4705 true chr08: 1889106-1893810 Salix purpurea
SapurV1A.0411s0230 1.0kb upstream 1.0kb upstream 1000 false chr08: 1892811-1893810 Salix purpurea
SapurV1A.0411s0230 1.0kb downstream 1.0kb downstream 4705 true chr08: 1888106-1892810 Salix purpurea
SapurV1A.0411s0230 1.0kb downstream 1.0kb downstream 1000 false chr08: 1888106-1889105 Salix purpurea
SapurV1A.0411s0230 2.0kb upstream 2.0kb upstream 5705 true chr08: 1889106-1894810 Salix purpurea
SapurV1A.0411s0230 2.0kb upstream 2.0kb upstream 2000 false chr08: 1892811-1894810 Salix purpurea
SapurV1A.0411s0230 2.0kb downstream 2.0kb downstream 5705 true chr08: 1887106-1892810 Salix purpurea
SapurV1A.0411s0230 2.0kb downstream 2.0kb downstream 2000 false chr08: 1887106-1889105 Salix purpurea
SapurV1A.0411s0230 5.0kb upstream 5.0kb upstream 8705 true chr08: 1889106-1897810 Salix purpurea
SapurV1A.0411s0230 5.0kb upstream 5.0kb upstream 5000 false chr08: 1892811-1897810 Salix purpurea
SapurV1A.0411s0230 5.0kb downstream 5.0kb downstream 8705 true chr08: 1884106-1892810 Salix purpurea
SapurV1A.0411s0230 5.0kb downstream 5.0kb downstream 5000 false chr08: 1884106-1889105 Salix purpurea
SapurV1A.0411s0230 10.0kb upstream 10.0kb upstream 13705 true chr08: 1889106-1902810 Salix purpurea
SapurV1A.0411s0230 10.0kb upstream 10.0kb upstream 10000 false chr08: 1892811-1902810 Salix purpurea
SapurV1A.0411s0230 10.0kb downstream 10.0kb downstream 13705 true chr08: 1879106-1892810 Salix purpurea
SapurV1A.0411s0230 10.0kb downstream 10.0kb downstream 10000 false chr08: 1879106-1889105 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453746 5262 Malpighiales View MSA
124237182 5268 Malvidae View MSA
124068541 5270 Rosid View MSA
123736657 5271 Pentapetalae View MSA
122791898 5272 Eudicot View MSA
122046966 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain