Gene : SapurV1A.0700s0060 S. purpurea v1.0
Defline:  (1 of 1) PTHR24015:SF705 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  1794
Name:  ? SapurV1A.0700s0060 Secondary Identifier:  ? PAC:31418923
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-1081 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0700s0060 0.5kb upstream 0.5kb upstream 5742 true chr08: 15176247-15181988 Salix purpurea
SapurV1A.0700s0060 0.5kb upstream 0.5kb upstream 500 false chr08: 15181489-15181988 Salix purpurea
SapurV1A.0700s0060 0.5kb downstream 0.5kb downstream 5742 true chr08: 15175747-15181488 Salix purpurea
SapurV1A.0700s0060 0.5kb downstream 0.5kb downstream 500 false chr08: 15175747-15176246 Salix purpurea
SapurV1A.0700s0060 1.0kb upstream 1.0kb upstream 6242 true chr08: 15176247-15182488 Salix purpurea
SapurV1A.0700s0060 1.0kb upstream 1.0kb upstream 1000 false chr08: 15181489-15182488 Salix purpurea
SapurV1A.0700s0060 1.0kb downstream 1.0kb downstream 6242 true chr08: 15175247-15181488 Salix purpurea
SapurV1A.0700s0060 1.0kb downstream 1.0kb downstream 1000 false chr08: 15175247-15176246 Salix purpurea
SapurV1A.0700s0060 2.0kb upstream 2.0kb upstream 7242 true chr08: 15176247-15183488 Salix purpurea
SapurV1A.0700s0060 2.0kb upstream 2.0kb upstream 2000 false chr08: 15181489-15183488 Salix purpurea
SapurV1A.0700s0060 2.0kb downstream 2.0kb downstream 7242 true chr08: 15174247-15181488 Salix purpurea
SapurV1A.0700s0060 2.0kb downstream 2.0kb downstream 2000 false chr08: 15174247-15176246 Salix purpurea
SapurV1A.0700s0060 5.0kb upstream 5.0kb upstream 10242 true chr08: 15176247-15186488 Salix purpurea
SapurV1A.0700s0060 5.0kb upstream 5.0kb upstream 5000 false chr08: 15181489-15186488 Salix purpurea
SapurV1A.0700s0060 5.0kb downstream 5.0kb downstream 10242 true chr08: 15171247-15181488 Salix purpurea
SapurV1A.0700s0060 5.0kb downstream 5.0kb downstream 5000 false chr08: 15171247-15176246 Salix purpurea
SapurV1A.0700s0060 10.0kb upstream 10.0kb upstream 15242 true chr08: 15176247-15191488 Salix purpurea
SapurV1A.0700s0060 10.0kb upstream 10.0kb upstream 10000 false chr08: 15181489-15191488 Salix purpurea
SapurV1A.0700s0060 10.0kb downstream 10.0kb downstream 15242 true chr08: 15166247-15181488 Salix purpurea
SapurV1A.0700s0060 10.0kb downstream 10.0kb downstream 10000 false chr08: 15166247-15176246 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122406608 5262 Malpighiales Singleton cluster - no MSA
124245641 5268 Malvidae View MSA
124069340 5270 Rosid View MSA
123627867 5271 Pentapetalae View MSA
122795496 5272 Eudicot View MSA
122048202 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310882 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain