Gene : SapurV1A.0058s0180 S. purpurea v1.0
Defline:  (1 of 2) PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1649
Name:  ? SapurV1A.0058s0180 Secondary Identifier:  ? PAC:31436108
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea GLYSYN-PWY Salix purpurea pathologic  
Spurpurea PWY-2161 Salix purpurea pathologic  
Spurpurea PWY-3841 Salix purpurea pathologic  
Spurpurea SER-GLYSYN-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0058s0180 0.5kb upstream 0.5kb upstream 3746 true chr16: 19104386-19108131 Salix purpurea
SapurV1A.0058s0180 0.5kb upstream 0.5kb upstream 500 false chr16: 19107632-19108131 Salix purpurea
SapurV1A.0058s0180 0.5kb downstream 0.5kb downstream 3746 true chr16: 19103886-19107631 Salix purpurea
SapurV1A.0058s0180 0.5kb downstream 0.5kb downstream 500 false chr16: 19103886-19104385 Salix purpurea
SapurV1A.0058s0180 1.0kb upstream 1.0kb upstream 4246 true chr16: 19104386-19108631 Salix purpurea
SapurV1A.0058s0180 1.0kb upstream 1.0kb upstream 1000 false chr16: 19107632-19108631 Salix purpurea
SapurV1A.0058s0180 1.0kb downstream 1.0kb downstream 4246 true chr16: 19103386-19107631 Salix purpurea
SapurV1A.0058s0180 1.0kb downstream 1.0kb downstream 1000 false chr16: 19103386-19104385 Salix purpurea
SapurV1A.0058s0180 2.0kb upstream 2.0kb upstream 5246 true chr16: 19104386-19109631 Salix purpurea
SapurV1A.0058s0180 2.0kb upstream 2.0kb upstream 2000 false chr16: 19107632-19109631 Salix purpurea
SapurV1A.0058s0180 2.0kb downstream 2.0kb downstream 5246 true chr16: 19102386-19107631 Salix purpurea
SapurV1A.0058s0180 2.0kb downstream 2.0kb downstream 2000 false chr16: 19102386-19104385 Salix purpurea
SapurV1A.0058s0180 5.0kb upstream 5.0kb upstream 8246 true chr16: 19104386-19112631 Salix purpurea
SapurV1A.0058s0180 5.0kb upstream 5.0kb upstream 5000 false chr16: 19107632-19112631 Salix purpurea
SapurV1A.0058s0180 5.0kb downstream 5.0kb downstream 8246 true chr16: 19099386-19107631 Salix purpurea
SapurV1A.0058s0180 5.0kb downstream 5.0kb downstream 5000 false chr16: 19099386-19104385 Salix purpurea
SapurV1A.0058s0180 10.0kb upstream 10.0kb upstream 13246 true chr16: 19104386-19117631 Salix purpurea
SapurV1A.0058s0180 10.0kb upstream 10.0kb upstream 10000 false chr16: 19107632-19117631 Salix purpurea
SapurV1A.0058s0180 10.0kb downstream 10.0kb downstream 13246 true chr16: 19094386-19107631 Salix purpurea
SapurV1A.0058s0180 10.0kb downstream 10.0kb downstream 10000 false chr16: 19094386-19104385 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458570 5262 Malpighiales View MSA
124241097 5268 Malvidae View MSA
124067933 5270 Rosid View MSA
123746459 5271 Pentapetalae View MSA
122786293 5272 Eudicot View MSA
122042145 5273 Angiosperm View MSA
121347378 5274 Embryophyte View MSA
123426459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain