Gene : SapurV1A.0797s0030 S. purpurea v1.0
Defline:  (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) Genomic Order:  468
Name:  ? SapurV1A.0797s0030 Secondary Identifier:  ? PAC:31436330
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea CAROTENOID-PWY Salix purpurea pathologic  
Spurpurea PWY-5943 Salix purpurea pathologic  
Spurpurea PWY-5947 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0797s0030 0.5kb upstream 0.5kb upstream 2813 true chr16: 6019665-6022477 Salix purpurea
SapurV1A.0797s0030 0.5kb upstream 0.5kb upstream 500 false chr16: 6021978-6022477 Salix purpurea
SapurV1A.0797s0030 0.5kb downstream 0.5kb downstream 2813 true chr16: 6019165-6021977 Salix purpurea
SapurV1A.0797s0030 0.5kb downstream 0.5kb downstream 500 false chr16: 6019165-6019664 Salix purpurea
SapurV1A.0797s0030 1.0kb upstream 1.0kb upstream 3313 true chr16: 6019665-6022977 Salix purpurea
SapurV1A.0797s0030 1.0kb upstream 1.0kb upstream 1000 false chr16: 6021978-6022977 Salix purpurea
SapurV1A.0797s0030 1.0kb downstream 1.0kb downstream 3313 true chr16: 6018665-6021977 Salix purpurea
SapurV1A.0797s0030 1.0kb downstream 1.0kb downstream 1000 false chr16: 6018665-6019664 Salix purpurea
SapurV1A.0797s0030 2.0kb upstream 2.0kb upstream 4313 true chr16: 6019665-6023977 Salix purpurea
SapurV1A.0797s0030 2.0kb upstream 2.0kb upstream 2000 false chr16: 6021978-6023977 Salix purpurea
SapurV1A.0797s0030 2.0kb downstream 2.0kb downstream 4313 true chr16: 6017665-6021977 Salix purpurea
SapurV1A.0797s0030 2.0kb downstream 2.0kb downstream 2000 false chr16: 6017665-6019664 Salix purpurea
SapurV1A.0797s0030 5.0kb upstream 5.0kb upstream 7313 true chr16: 6019665-6026977 Salix purpurea
SapurV1A.0797s0030 5.0kb upstream 5.0kb upstream 5000 false chr16: 6021978-6026977 Salix purpurea
SapurV1A.0797s0030 5.0kb downstream 5.0kb downstream 7313 true chr16: 6014665-6021977 Salix purpurea
SapurV1A.0797s0030 5.0kb downstream 5.0kb downstream 5000 false chr16: 6014665-6019664 Salix purpurea
SapurV1A.0797s0030 10.0kb upstream 10.0kb upstream 12313 true chr16: 6019665-6031977 Salix purpurea
SapurV1A.0797s0030 10.0kb upstream 10.0kb upstream 10000 false chr16: 6021978-6031977 Salix purpurea
SapurV1A.0797s0030 10.0kb downstream 10.0kb downstream 12313 true chr16: 6009665-6021977 Salix purpurea
SapurV1A.0797s0030 10.0kb downstream 10.0kb downstream 10000 false chr16: 6009665-6019664 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449867 5262 Malpighiales View MSA
124240984 5268 Malvidae View MSA
124065821 5270 Rosid View MSA
123737595 5271 Pentapetalae View MSA
122786885 5272 Eudicot View MSA
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain