Gene : SapurV1A.0727s0050 S. purpurea v1.0
Defline:  (1 of 8) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1820
Name:  ? SapurV1A.0727s0050 Secondary Identifier:  ? PAC:31438980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0727s0050 0.5kb upstream 0.5kb upstream 1834 true chr16: 20612753-20614586 Salix purpurea
SapurV1A.0727s0050 0.5kb upstream 0.5kb upstream 500 false chr16: 20612753-20613252 Salix purpurea
SapurV1A.0727s0050 0.5kb downstream 0.5kb downstream 1834 true chr16: 20613253-20615086 Salix purpurea
SapurV1A.0727s0050 0.5kb downstream 0.5kb downstream 500 false chr16: 20614587-20615086 Salix purpurea
SapurV1A.0727s0050 1.0kb upstream 1.0kb upstream 2334 true chr16: 20612253-20614586 Salix purpurea
SapurV1A.0727s0050 1.0kb upstream 1.0kb upstream 1000 false chr16: 20612253-20613252 Salix purpurea
SapurV1A.0727s0050 1.0kb downstream 1.0kb downstream 2334 true chr16: 20613253-20615586 Salix purpurea
SapurV1A.0727s0050 1.0kb downstream 1.0kb downstream 1000 false chr16: 20614587-20615586 Salix purpurea
SapurV1A.0727s0050 2.0kb upstream 2.0kb upstream 3334 true chr16: 20611253-20614586 Salix purpurea
SapurV1A.0727s0050 2.0kb upstream 2.0kb upstream 2000 false chr16: 20611253-20613252 Salix purpurea
SapurV1A.0727s0050 2.0kb downstream 2.0kb downstream 3334 true chr16: 20613253-20616586 Salix purpurea
SapurV1A.0727s0050 2.0kb downstream 2.0kb downstream 2000 false chr16: 20614587-20616586 Salix purpurea
SapurV1A.0727s0050 5.0kb upstream 5.0kb upstream 6334 true chr16: 20608253-20614586 Salix purpurea
SapurV1A.0727s0050 5.0kb upstream 5.0kb upstream 5000 false chr16: 20608253-20613252 Salix purpurea
SapurV1A.0727s0050 5.0kb downstream 5.0kb downstream 6334 true chr16: 20613253-20619586 Salix purpurea
SapurV1A.0727s0050 5.0kb downstream 5.0kb downstream 5000 false chr16: 20614587-20619586 Salix purpurea
SapurV1A.0727s0050 10.0kb upstream 10.0kb upstream 11334 true chr16: 20603253-20614586 Salix purpurea
SapurV1A.0727s0050 10.0kb upstream 10.0kb upstream 10000 false chr16: 20603253-20613252 Salix purpurea
SapurV1A.0727s0050 10.0kb downstream 10.0kb downstream 11334 true chr16: 20613253-20624586 Salix purpurea
SapurV1A.0727s0050 10.0kb downstream 10.0kb downstream 10000 false chr16: 20614587-20624586 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461437 5262 Malpighiales View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain