Gene : SapurV1A.0006s0420 S. purpurea v1.0

Defline:  (1 of 3) K02725 - 20S proteasome subunit alpha 6 (PSMA1) Genomic Order:  293
Name:  ? SapurV1A.0006s0420 Secondary Identifier:  ? PAC:31404971

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0006s0420 0.5kb upstream 0.5kb upstream 3012 true chr02: 2353669-2356680 Salix purpurea
SapurV1A.0006s0420 0.5kb upstream 0.5kb upstream 500 false chr02: 2353669-2354168 Salix purpurea
SapurV1A.0006s0420 0.5kb downstream 0.5kb downstream 3012 true chr02: 2354169-2357180 Salix purpurea
SapurV1A.0006s0420 0.5kb downstream 0.5kb downstream 500 false chr02: 2356681-2357180 Salix purpurea
SapurV1A.0006s0420 1.0kb upstream 1.0kb upstream 3512 true chr02: 2353169-2356680 Salix purpurea
SapurV1A.0006s0420 1.0kb upstream 1.0kb upstream 1000 false chr02: 2353169-2354168 Salix purpurea
SapurV1A.0006s0420 1.0kb downstream 1.0kb downstream 3512 true chr02: 2354169-2357680 Salix purpurea
SapurV1A.0006s0420 1.0kb downstream 1.0kb downstream 1000 false chr02: 2356681-2357680 Salix purpurea
SapurV1A.0006s0420 2.0kb upstream 2.0kb upstream 4512 true chr02: 2352169-2356680 Salix purpurea
SapurV1A.0006s0420 2.0kb upstream 2.0kb upstream 2000 false chr02: 2352169-2354168 Salix purpurea
SapurV1A.0006s0420 2.0kb downstream 2.0kb downstream 4512 true chr02: 2354169-2358680 Salix purpurea
SapurV1A.0006s0420 2.0kb downstream 2.0kb downstream 2000 false chr02: 2356681-2358680 Salix purpurea
SapurV1A.0006s0420 5.0kb upstream 5.0kb upstream 7512 true chr02: 2349169-2356680 Salix purpurea
SapurV1A.0006s0420 5.0kb upstream 5.0kb upstream 5000 false chr02: 2349169-2354168 Salix purpurea
SapurV1A.0006s0420 5.0kb downstream 5.0kb downstream 7512 true chr02: 2354169-2361680 Salix purpurea
SapurV1A.0006s0420 5.0kb downstream 5.0kb downstream 5000 false chr02: 2356681-2361680 Salix purpurea
SapurV1A.0006s0420 10.0kb upstream 10.0kb upstream 12512 true chr02: 2344169-2356680 Salix purpurea
SapurV1A.0006s0420 10.0kb upstream 10.0kb upstream 10000 false chr02: 2344169-2354168 Salix purpurea
SapurV1A.0006s0420 10.0kb downstream 10.0kb downstream 12512 true chr02: 2354169-2366680 Salix purpurea
SapurV1A.0006s0420 10.0kb downstream 10.0kb downstream 10000 false chr02: 2356681-2366680 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122462200 5262 Malpighiales View MSA
124251312 5268 Malvidae View MSA
124065992 5270 Rosid View MSA
123739295 5271 Pentapetalae View MSA
122791097 5272 Eudicot View MSA
122046892 5273 Angiosperm View MSA
121347001 5274 Embryophyte View MSA
123424863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain