Gene : SapurV1A.0056s0610 S. purpurea v1.0
Defline:  (1 of 1) PTHR10543//PTHR10543:SF48 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED6, CHLOROPLASTIC Genomic Order:  1413
Name:  ? SapurV1A.0056s0610 Secondary Identifier:  ? PAC:31445394
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-695 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0056s0610 0.5kb upstream 0.5kb upstream 2339 true chr03: 14459641-14461979 Salix purpurea
SapurV1A.0056s0610 0.5kb upstream 0.5kb upstream 500 false chr03: 14461480-14461979 Salix purpurea
SapurV1A.0056s0610 0.5kb downstream 0.5kb downstream 2339 true chr03: 14459141-14461479 Salix purpurea
SapurV1A.0056s0610 0.5kb downstream 0.5kb downstream 500 false chr03: 14459141-14459640 Salix purpurea
SapurV1A.0056s0610 1.0kb upstream 1.0kb upstream 2839 true chr03: 14459641-14462479 Salix purpurea
SapurV1A.0056s0610 1.0kb upstream 1.0kb upstream 1000 false chr03: 14461480-14462479 Salix purpurea
SapurV1A.0056s0610 1.0kb downstream 1.0kb downstream 2839 true chr03: 14458641-14461479 Salix purpurea
SapurV1A.0056s0610 1.0kb downstream 1.0kb downstream 1000 false chr03: 14458641-14459640 Salix purpurea
SapurV1A.0056s0610 2.0kb upstream 2.0kb upstream 3839 true chr03: 14459641-14463479 Salix purpurea
SapurV1A.0056s0610 2.0kb upstream 2.0kb upstream 2000 false chr03: 14461480-14463479 Salix purpurea
SapurV1A.0056s0610 2.0kb downstream 2.0kb downstream 3839 true chr03: 14457641-14461479 Salix purpurea
SapurV1A.0056s0610 2.0kb downstream 2.0kb downstream 2000 false chr03: 14457641-14459640 Salix purpurea
SapurV1A.0056s0610 5.0kb upstream 5.0kb upstream 6839 true chr03: 14459641-14466479 Salix purpurea
SapurV1A.0056s0610 5.0kb upstream 5.0kb upstream 5000 false chr03: 14461480-14466479 Salix purpurea
SapurV1A.0056s0610 5.0kb downstream 5.0kb downstream 6839 true chr03: 14454641-14461479 Salix purpurea
SapurV1A.0056s0610 5.0kb downstream 5.0kb downstream 5000 false chr03: 14454641-14459640 Salix purpurea
SapurV1A.0056s0610 10.0kb upstream 10.0kb upstream 11839 true chr03: 14459641-14471479 Salix purpurea
SapurV1A.0056s0610 10.0kb upstream 10.0kb upstream 10000 false chr03: 14461480-14471479 Salix purpurea
SapurV1A.0056s0610 10.0kb downstream 10.0kb downstream 11839 true chr03: 14449641-14461479 Salix purpurea
SapurV1A.0056s0610 10.0kb downstream 10.0kb downstream 10000 false chr03: 14449641-14459640 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452979 5262 Malpighiales View MSA
124242947 5268 Malvidae View MSA
124068526 5270 Rosid View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain