Gene : SapurV1A.0028s0040 S. purpurea v1.0
Defline:  (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) Genomic Order:  232
Name:  ? SapurV1A.0028s0040 Secondary Identifier:  ? PAC:31435256
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0028s0040 0.5kb upstream 0.5kb upstream 2314 true chr04: 1791483-1793796 Salix purpurea
SapurV1A.0028s0040 0.5kb upstream 0.5kb upstream 500 false chr04: 1793297-1793796 Salix purpurea
SapurV1A.0028s0040 0.5kb downstream 0.5kb downstream 2314 true chr04: 1790983-1793296 Salix purpurea
SapurV1A.0028s0040 0.5kb downstream 0.5kb downstream 500 false chr04: 1790983-1791482 Salix purpurea
SapurV1A.0028s0040 1.0kb upstream 1.0kb upstream 2814 true chr04: 1791483-1794296 Salix purpurea
SapurV1A.0028s0040 1.0kb upstream 1.0kb upstream 1000 false chr04: 1793297-1794296 Salix purpurea
SapurV1A.0028s0040 1.0kb downstream 1.0kb downstream 2814 true chr04: 1790483-1793296 Salix purpurea
SapurV1A.0028s0040 1.0kb downstream 1.0kb downstream 1000 false chr04: 1790483-1791482 Salix purpurea
SapurV1A.0028s0040 2.0kb upstream 2.0kb upstream 3814 true chr04: 1791483-1795296 Salix purpurea
SapurV1A.0028s0040 2.0kb upstream 2.0kb upstream 2000 false chr04: 1793297-1795296 Salix purpurea
SapurV1A.0028s0040 2.0kb downstream 2.0kb downstream 3814 true chr04: 1789483-1793296 Salix purpurea
SapurV1A.0028s0040 2.0kb downstream 2.0kb downstream 2000 false chr04: 1789483-1791482 Salix purpurea
SapurV1A.0028s0040 5.0kb upstream 5.0kb upstream 6814 true chr04: 1791483-1798296 Salix purpurea
SapurV1A.0028s0040 5.0kb upstream 5.0kb upstream 5000 false chr04: 1793297-1798296 Salix purpurea
SapurV1A.0028s0040 5.0kb downstream 5.0kb downstream 6814 true chr04: 1786483-1793296 Salix purpurea
SapurV1A.0028s0040 5.0kb downstream 5.0kb downstream 5000 false chr04: 1786483-1791482 Salix purpurea
SapurV1A.0028s0040 10.0kb upstream 10.0kb upstream 11814 true chr04: 1791483-1803296 Salix purpurea
SapurV1A.0028s0040 10.0kb upstream 10.0kb upstream 10000 false chr04: 1793297-1803296 Salix purpurea
SapurV1A.0028s0040 10.0kb downstream 10.0kb downstream 11814 true chr04: 1781483-1793296 Salix purpurea
SapurV1A.0028s0040 10.0kb downstream 10.0kb downstream 10000 false chr04: 1781483-1791482 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122408161 5262 Malpighiales Singleton cluster - no MSA
124244249 5268 Malvidae View MSA
124064645 5270 Rosid View MSA
123751452 5271 Pentapetalae View MSA
122791006 5272 Eudicot View MSA
122044389 5273 Angiosperm View MSA
121350792 5274 Embryophyte View MSA
123425897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain