Gene : SapurV1A.0102s0150 S. purpurea v1.0
Defline:  (1 of 7) K13789 - geranylgeranyl diphosphate synthase, type II (GGPS) Genomic Order:  789
Name:  ? SapurV1A.0102s0150 Secondary Identifier:  ? PAC:31434642
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-5120 Salix purpurea pathologic  
Spurpurea PWY-5910 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0102s0150 0.5kb upstream 0.5kb upstream 1580 true chr04: 10164568-10166147 Salix purpurea
SapurV1A.0102s0150 0.5kb upstream 0.5kb upstream 500 false chr04: 10165648-10166147 Salix purpurea
SapurV1A.0102s0150 0.5kb downstream 0.5kb downstream 1580 true chr04: 10164068-10165647 Salix purpurea
SapurV1A.0102s0150 0.5kb downstream 0.5kb downstream 500 false chr04: 10164068-10164567 Salix purpurea
SapurV1A.0102s0150 1.0kb upstream 1.0kb upstream 2080 true chr04: 10164568-10166647 Salix purpurea
SapurV1A.0102s0150 1.0kb upstream 1.0kb upstream 1000 false chr04: 10165648-10166647 Salix purpurea
SapurV1A.0102s0150 1.0kb downstream 1.0kb downstream 2080 true chr04: 10163568-10165647 Salix purpurea
SapurV1A.0102s0150 1.0kb downstream 1.0kb downstream 1000 false chr04: 10163568-10164567 Salix purpurea
SapurV1A.0102s0150 2.0kb upstream 2.0kb upstream 3080 true chr04: 10164568-10167647 Salix purpurea
SapurV1A.0102s0150 2.0kb upstream 2.0kb upstream 2000 false chr04: 10165648-10167647 Salix purpurea
SapurV1A.0102s0150 2.0kb downstream 2.0kb downstream 3080 true chr04: 10162568-10165647 Salix purpurea
SapurV1A.0102s0150 2.0kb downstream 2.0kb downstream 2000 false chr04: 10162568-10164567 Salix purpurea
SapurV1A.0102s0150 5.0kb upstream 5.0kb upstream 6080 true chr04: 10164568-10170647 Salix purpurea
SapurV1A.0102s0150 5.0kb upstream 5.0kb upstream 5000 false chr04: 10165648-10170647 Salix purpurea
SapurV1A.0102s0150 5.0kb downstream 5.0kb downstream 6080 true chr04: 10159568-10165647 Salix purpurea
SapurV1A.0102s0150 5.0kb downstream 5.0kb downstream 5000 false chr04: 10159568-10164567 Salix purpurea
SapurV1A.0102s0150 10.0kb upstream 10.0kb upstream 11080 true chr04: 10164568-10175647 Salix purpurea
SapurV1A.0102s0150 10.0kb upstream 10.0kb upstream 10000 false chr04: 10165648-10175647 Salix purpurea
SapurV1A.0102s0150 10.0kb downstream 10.0kb downstream 11080 true chr04: 10154568-10165647 Salix purpurea
SapurV1A.0102s0150 10.0kb downstream 10.0kb downstream 10000 false chr04: 10154568-10164567 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451890 5262 Malpighiales View MSA
124251250 5268 Malvidae View MSA
124051358 5270 Rosid View MSA
123745518 5271 Pentapetalae View MSA
122795597 5272 Eudicot View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain