Gene : SapurV1A.0315s0040 S. purpurea v1.0
Defline:  (1 of 5) 5.3.99.9 - Neoxanthin synthase / NSY Genomic Order:  515
Name:  ? SapurV1A.0315s0040 Secondary Identifier:  ? PAC:31435657
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-6809 Salix purpurea pathologic  
Spurpurea PWY-695 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0315s0040 0.5kb upstream 0.5kb upstream 4638 true chr04: 6328529-6333166 Salix purpurea
SapurV1A.0315s0040 0.5kb upstream 0.5kb upstream 500 false chr04: 6332667-6333166 Salix purpurea
SapurV1A.0315s0040 0.5kb downstream 0.5kb downstream 4638 true chr04: 6328029-6332666 Salix purpurea
SapurV1A.0315s0040 0.5kb downstream 0.5kb downstream 500 false chr04: 6328029-6328528 Salix purpurea
SapurV1A.0315s0040 1.0kb upstream 1.0kb upstream 5138 true chr04: 6328529-6333666 Salix purpurea
SapurV1A.0315s0040 1.0kb upstream 1.0kb upstream 1000 false chr04: 6332667-6333666 Salix purpurea
SapurV1A.0315s0040 1.0kb downstream 1.0kb downstream 5138 true chr04: 6327529-6332666 Salix purpurea
SapurV1A.0315s0040 1.0kb downstream 1.0kb downstream 1000 false chr04: 6327529-6328528 Salix purpurea
SapurV1A.0315s0040 2.0kb upstream 2.0kb upstream 6138 true chr04: 6328529-6334666 Salix purpurea
SapurV1A.0315s0040 2.0kb upstream 2.0kb upstream 2000 false chr04: 6332667-6334666 Salix purpurea
SapurV1A.0315s0040 2.0kb downstream 2.0kb downstream 6138 true chr04: 6326529-6332666 Salix purpurea
SapurV1A.0315s0040 2.0kb downstream 2.0kb downstream 2000 false chr04: 6326529-6328528 Salix purpurea
SapurV1A.0315s0040 5.0kb upstream 5.0kb upstream 9138 true chr04: 6328529-6337666 Salix purpurea
SapurV1A.0315s0040 5.0kb upstream 5.0kb upstream 5000 false chr04: 6332667-6337666 Salix purpurea
SapurV1A.0315s0040 5.0kb downstream 5.0kb downstream 9138 true chr04: 6323529-6332666 Salix purpurea
SapurV1A.0315s0040 5.0kb downstream 5.0kb downstream 5000 false chr04: 6323529-6328528 Salix purpurea
SapurV1A.0315s0040 10.0kb upstream 10.0kb upstream 14138 true chr04: 6328529-6342666 Salix purpurea
SapurV1A.0315s0040 10.0kb upstream 10.0kb upstream 10000 false chr04: 6332667-6342666 Salix purpurea
SapurV1A.0315s0040 10.0kb downstream 10.0kb downstream 14138 true chr04: 6318529-6332666 Salix purpurea
SapurV1A.0315s0040 10.0kb downstream 10.0kb downstream 10000 false chr04: 6318529-6328528 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457721 5262 Malpighiales View MSA
124248470 5268 Malvidae View MSA
124062178 5270 Rosid View MSA
123748588 5271 Pentapetalae View MSA
122790006 5272 Eudicot View MSA
122047205 5273 Angiosperm View MSA
121346000 5274 Embryophyte View MSA
123425892 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain