Gene : SapurV1A.0333s0320 S. purpurea v1.0
Defline:  (1 of 2) K01899 - succinyl-CoA synthetase alpha subunit (LSC1) Genomic Order:  654
Name:  ? SapurV1A.0333s0320 Secondary Identifier:  ? PAC:31426987
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-5464 Salix purpurea pathologic  
Spurpurea PWY-5690 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0333s0320 0.5kb upstream 0.5kb upstream 4692 true chr05: 6000707-6005398 Salix purpurea
SapurV1A.0333s0320 0.5kb upstream 0.5kb upstream 500 false chr05: 6004899-6005398 Salix purpurea
SapurV1A.0333s0320 0.5kb downstream 0.5kb downstream 4692 true chr05: 6000207-6004898 Salix purpurea
SapurV1A.0333s0320 0.5kb downstream 0.5kb downstream 500 false chr05: 6000207-6000706 Salix purpurea
SapurV1A.0333s0320 1.0kb upstream 1.0kb upstream 5192 true chr05: 6000707-6005898 Salix purpurea
SapurV1A.0333s0320 1.0kb upstream 1.0kb upstream 1000 false chr05: 6004899-6005898 Salix purpurea
SapurV1A.0333s0320 1.0kb downstream 1.0kb downstream 5192 true chr05: 5999707-6004898 Salix purpurea
SapurV1A.0333s0320 1.0kb downstream 1.0kb downstream 1000 false chr05: 5999707-6000706 Salix purpurea
SapurV1A.0333s0320 2.0kb upstream 2.0kb upstream 6192 true chr05: 6000707-6006898 Salix purpurea
SapurV1A.0333s0320 2.0kb upstream 2.0kb upstream 2000 false chr05: 6004899-6006898 Salix purpurea
SapurV1A.0333s0320 2.0kb downstream 2.0kb downstream 6192 true chr05: 5998707-6004898 Salix purpurea
SapurV1A.0333s0320 2.0kb downstream 2.0kb downstream 2000 false chr05: 5998707-6000706 Salix purpurea
SapurV1A.0333s0320 5.0kb upstream 5.0kb upstream 9192 true chr05: 6000707-6009898 Salix purpurea
SapurV1A.0333s0320 5.0kb upstream 5.0kb upstream 5000 false chr05: 6004899-6009898 Salix purpurea
SapurV1A.0333s0320 5.0kb downstream 5.0kb downstream 9192 true chr05: 5995707-6004898 Salix purpurea
SapurV1A.0333s0320 5.0kb downstream 5.0kb downstream 5000 false chr05: 5995707-6000706 Salix purpurea
SapurV1A.0333s0320 10.0kb upstream 10.0kb upstream 14192 true chr05: 6000707-6014898 Salix purpurea
SapurV1A.0333s0320 10.0kb upstream 10.0kb upstream 10000 false chr05: 6004899-6014898 Salix purpurea
SapurV1A.0333s0320 10.0kb downstream 10.0kb downstream 14192 true chr05: 5990707-6004898 Salix purpurea
SapurV1A.0333s0320 10.0kb downstream 10.0kb downstream 10000 false chr05: 5990707-6000706 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460895 5262 Malpighiales View MSA
124250817 5268 Malvidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain