Gene : 137879 S. moellendorffii v1.0
Defline:  (1 of 1) PTHR33149:SF1 - PHOTOSYSTEM II D2 PROTEIN Genomic Order:  13
Name:  ? 137879 Secondary Identifier:  ? PAC:15423030
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii PHOTOALL-PWY Selaginella moellendorffii pathologic  
Smoellendorffii PWY-101 Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
137879 0.5kb upstream 0.5kb upstream 1562 true scaffold_175: 33351-34912 Selaginella moellendorffii
137879 0.5kb upstream 0.5kb upstream 500 false scaffold_175: 33351-33850 Selaginella moellendorffii
137879 0.5kb downstream 0.5kb downstream 1562 true scaffold_175: 33851-35412 Selaginella moellendorffii
137879 0.5kb downstream 0.5kb downstream 500 false scaffold_175: 34913-35412 Selaginella moellendorffii
137879 1.0kb upstream 1.0kb upstream 2062 true scaffold_175: 32851-34912 Selaginella moellendorffii
137879 1.0kb upstream 1.0kb upstream 1000 false scaffold_175: 32851-33850 Selaginella moellendorffii
137879 1.0kb downstream 1.0kb downstream 2062 true scaffold_175: 33851-35912 Selaginella moellendorffii
137879 1.0kb downstream 1.0kb downstream 1000 false scaffold_175: 34913-35912 Selaginella moellendorffii
137879 2.0kb upstream 2.0kb upstream 3062 true scaffold_175: 31851-34912 Selaginella moellendorffii
137879 2.0kb upstream 2.0kb upstream 2000 false scaffold_175: 31851-33850 Selaginella moellendorffii
137879 2.0kb downstream 2.0kb downstream 3062 true scaffold_175: 33851-36912 Selaginella moellendorffii
137879 2.0kb downstream 2.0kb downstream 2000 false scaffold_175: 34913-36912 Selaginella moellendorffii
137879 5.0kb upstream 5.0kb upstream 6062 true scaffold_175: 28851-34912 Selaginella moellendorffii
137879 5.0kb upstream 5.0kb upstream 5000 false scaffold_175: 28851-33850 Selaginella moellendorffii
137879 5.0kb downstream 5.0kb downstream 6062 true scaffold_175: 33851-39912 Selaginella moellendorffii
137879 5.0kb downstream 5.0kb downstream 5000 false scaffold_175: 34913-39912 Selaginella moellendorffii
137879 10.0kb upstream 10.0kb upstream 11062 true scaffold_175: 23851-34912 Selaginella moellendorffii
137879 10.0kb upstream 10.0kb upstream 10000 false scaffold_175: 23851-33850 Selaginella moellendorffii
137879 10.0kb downstream 10.0kb downstream 11062 true scaffold_175: 33851-44912 Selaginella moellendorffii
137879 10.0kb downstream 10.0kb downstream 10000 false scaffold_175: 34913-44912 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121316084 5274 Embryophyte Singleton cluster - no MSA
123353194 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain