Gene : 3542 S. moellendorffii v1.0
Defline:  (1 of 5) KOG0940 - Ubiquitin protein ligase RSP5/NEDD4 Genomic Order:  270
Name:  ? 3542 Secondary Identifier:  ? PAC:15413740
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii PWY-7511 Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
3542 0.5kb upstream 0.5kb upstream 1731 true scaffold_18: 1460809-1462539 Selaginella moellendorffii
3542 0.5kb upstream 0.5kb upstream 500 false scaffold_18: 1460809-1461308 Selaginella moellendorffii
3542 0.5kb downstream 0.5kb downstream 1731 true scaffold_18: 1461309-1463039 Selaginella moellendorffii
3542 0.5kb downstream 0.5kb downstream 500 false scaffold_18: 1462540-1463039 Selaginella moellendorffii
3542 1.0kb upstream 1.0kb upstream 2231 true scaffold_18: 1460309-1462539 Selaginella moellendorffii
3542 1.0kb upstream 1.0kb upstream 1000 false scaffold_18: 1460309-1461308 Selaginella moellendorffii
3542 1.0kb downstream 1.0kb downstream 2231 true scaffold_18: 1461309-1463539 Selaginella moellendorffii
3542 1.0kb downstream 1.0kb downstream 1000 false scaffold_18: 1462540-1463539 Selaginella moellendorffii
3542 2.0kb upstream 2.0kb upstream 3231 true scaffold_18: 1459309-1462539 Selaginella moellendorffii
3542 2.0kb upstream 2.0kb upstream 2000 false scaffold_18: 1459309-1461308 Selaginella moellendorffii
3542 2.0kb downstream 2.0kb downstream 3231 true scaffold_18: 1461309-1464539 Selaginella moellendorffii
3542 2.0kb downstream 2.0kb downstream 2000 false scaffold_18: 1462540-1464539 Selaginella moellendorffii
3542 5.0kb upstream 5.0kb upstream 6231 true scaffold_18: 1456309-1462539 Selaginella moellendorffii
3542 5.0kb upstream 5.0kb upstream 5000 false scaffold_18: 1456309-1461308 Selaginella moellendorffii
3542 5.0kb downstream 5.0kb downstream 6231 true scaffold_18: 1461309-1467539 Selaginella moellendorffii
3542 5.0kb downstream 5.0kb downstream 5000 false scaffold_18: 1462540-1467539 Selaginella moellendorffii
3542 10.0kb upstream 10.0kb upstream 11231 true scaffold_18: 1451309-1462539 Selaginella moellendorffii
3542 10.0kb upstream 10.0kb upstream 10000 false scaffold_18: 1451309-1461308 Selaginella moellendorffii
3542 10.0kb downstream 10.0kb downstream 11231 true scaffold_18: 1461309-1472539 Selaginella moellendorffii
3542 10.0kb downstream 10.0kb downstream 10000 false scaffold_18: 1462540-1472539 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121322981 5274 Embryophyte View MSA
123360052 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain