Gene : evm_27.TU.AmTr_v1.0_scaffold00001.409 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Genomic Order:  402
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.409 Secondary Identifier:  ? PAC:31550929
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.409 0.5kb upstream 0.5kb upstream 65190 true AmTr_v1.0_scaffold00001: 8708320-8773509 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 8773010-8773509 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 0.5kb downstream 0.5kb downstream 65190 true AmTr_v1.0_scaffold00001: 8707820-8773009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 8707820-8708319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 1.0kb upstream 1.0kb upstream 65690 true AmTr_v1.0_scaffold00001: 8708320-8774009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 8773010-8774009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 1.0kb downstream 1.0kb downstream 65690 true AmTr_v1.0_scaffold00001: 8707320-8773009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 8707320-8708319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 2.0kb upstream 2.0kb upstream 66690 true AmTr_v1.0_scaffold00001: 8708320-8775009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 8773010-8775009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 2.0kb downstream 2.0kb downstream 66690 true AmTr_v1.0_scaffold00001: 8706320-8773009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 8706320-8708319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 5.0kb upstream 5.0kb upstream 69690 true AmTr_v1.0_scaffold00001: 8708320-8778009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 8773010-8778009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 5.0kb downstream 5.0kb downstream 69690 true AmTr_v1.0_scaffold00001: 8703320-8773009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 8703320-8708319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 10.0kb upstream 10.0kb upstream 74690 true AmTr_v1.0_scaffold00001: 8708320-8783009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 8773010-8783009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 10.0kb downstream 10.0kb downstream 74690 true AmTr_v1.0_scaffold00001: 8698320-8773009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.409 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 8698320-8708319 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain