Gene : evm_27.TU.AmTr_v1.0_scaffold00001.366 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13696:SF1 - SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATED Genomic Order:  362
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.366 Secondary Identifier:  ? PAC:31551508
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.366 0.5kb upstream 0.5kb upstream 1475 true AmTr_v1.0_scaffold00001: 7425120-7426594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 7425120-7425619 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 0.5kb downstream 0.5kb downstream 1475 true AmTr_v1.0_scaffold00001: 7425620-7427094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 7426595-7427094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 1.0kb upstream 1.0kb upstream 1975 true AmTr_v1.0_scaffold00001: 7424620-7426594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 7424620-7425619 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 1.0kb downstream 1.0kb downstream 1975 true AmTr_v1.0_scaffold00001: 7425620-7427594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 7426595-7427594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 2.0kb upstream 2.0kb upstream 2975 true AmTr_v1.0_scaffold00001: 7423620-7426594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 7423620-7425619 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 2.0kb downstream 2.0kb downstream 2975 true AmTr_v1.0_scaffold00001: 7425620-7428594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 7426595-7428594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 5.0kb upstream 5.0kb upstream 5975 true AmTr_v1.0_scaffold00001: 7420620-7426594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 7420620-7425619 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 5.0kb downstream 5.0kb downstream 5975 true AmTr_v1.0_scaffold00001: 7425620-7431594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 7426595-7431594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 10.0kb upstream 10.0kb upstream 10975 true AmTr_v1.0_scaffold00001: 7415620-7426594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 7415620-7425619 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 10.0kb downstream 10.0kb downstream 10975 true AmTr_v1.0_scaffold00001: 7425620-7436594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.366 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 7426595-7436594 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045379 5273 Angiosperm View MSA
121344611 5274 Embryophyte View MSA
123425268 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain