Gene : evm_27.TU.AmTr_v1.0_scaffold00001.200 A. trichopoda v1.0
Defline:  (1 of 5) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Genomic Order:  197
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.200 Secondary Identifier:  ? PAC:31551428
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda PWY-5690 Amborella trichopoda pathologic  
Atrichopoda PWY-6549 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.200 0.5kb upstream 0.5kb upstream 12523 true AmTr_v1.0_scaffold00001: 3698435-3710957 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 3710458-3710957 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 0.5kb downstream 0.5kb downstream 12523 true AmTr_v1.0_scaffold00001: 3697935-3710457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 3697935-3698434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 1.0kb upstream 1.0kb upstream 13023 true AmTr_v1.0_scaffold00001: 3698435-3711457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 3710458-3711457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 1.0kb downstream 1.0kb downstream 13023 true AmTr_v1.0_scaffold00001: 3697435-3710457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 3697435-3698434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 2.0kb upstream 2.0kb upstream 14023 true AmTr_v1.0_scaffold00001: 3698435-3712457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 3710458-3712457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 2.0kb downstream 2.0kb downstream 14023 true AmTr_v1.0_scaffold00001: 3696435-3710457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 3696435-3698434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 5.0kb upstream 5.0kb upstream 17023 true AmTr_v1.0_scaffold00001: 3698435-3715457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 3710458-3715457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 5.0kb downstream 5.0kb downstream 17023 true AmTr_v1.0_scaffold00001: 3693435-3710457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 3693435-3698434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 10.0kb upstream 10.0kb upstream 22023 true AmTr_v1.0_scaffold00001: 3698435-3720457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 3710458-3720457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 10.0kb downstream 10.0kb downstream 22023 true AmTr_v1.0_scaffold00001: 3688435-3710457 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.200 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 3688435-3698434 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041698 5273 Angiosperm View MSA
121349734 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain