Gene : evm_27.TU.AmTr_v1.0_scaffold00001.18 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  18
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.18 Secondary Identifier:  ? PAC:31551326
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda CYSTSYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-6936 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.18 0.5kb upstream 0.5kb upstream 12535 true AmTr_v1.0_scaffold00001: 266445-278979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 266445-266944 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 0.5kb downstream 0.5kb downstream 12535 true AmTr_v1.0_scaffold00001: 266945-279479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 278980-279479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 1.0kb upstream 1.0kb upstream 13035 true AmTr_v1.0_scaffold00001: 265945-278979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 265945-266944 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 1.0kb downstream 1.0kb downstream 13035 true AmTr_v1.0_scaffold00001: 266945-279979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 278980-279979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 2.0kb upstream 2.0kb upstream 14035 true AmTr_v1.0_scaffold00001: 264945-278979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 264945-266944 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 2.0kb downstream 2.0kb downstream 14035 true AmTr_v1.0_scaffold00001: 266945-280979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 278980-280979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 5.0kb upstream 5.0kb upstream 17035 true AmTr_v1.0_scaffold00001: 261945-278979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 261945-266944 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 5.0kb downstream 5.0kb downstream 17035 true AmTr_v1.0_scaffold00001: 266945-283979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 278980-283979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 10.0kb upstream 10.0kb upstream 22035 true AmTr_v1.0_scaffold00001: 256945-278979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 256945-266944 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 10.0kb downstream 10.0kb downstream 22035 true AmTr_v1.0_scaffold00001: 266945-288979 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.18 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 278980-288979 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain