Gene : evm_27.TU.AmTr_v1.0_scaffold00001.28 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10357:SF110 - PROTEIN T04A8.7, ISOFORM A Genomic Order:  28
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.28 Secondary Identifier:  ? PAC:31551045
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLYCOGENSYNTH-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-622 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.28 0.5kb upstream 0.5kb upstream 9372 true AmTr_v1.0_scaffold00001: 447892-457263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 447892-448391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 0.5kb downstream 0.5kb downstream 9372 true AmTr_v1.0_scaffold00001: 448392-457763 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 457264-457763 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 1.0kb upstream 1.0kb upstream 9872 true AmTr_v1.0_scaffold00001: 447392-457263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 447392-448391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 1.0kb downstream 1.0kb downstream 9872 true AmTr_v1.0_scaffold00001: 448392-458263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 457264-458263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 2.0kb upstream 2.0kb upstream 10872 true AmTr_v1.0_scaffold00001: 446392-457263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 446392-448391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 2.0kb downstream 2.0kb downstream 10872 true AmTr_v1.0_scaffold00001: 448392-459263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 457264-459263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 5.0kb upstream 5.0kb upstream 13872 true AmTr_v1.0_scaffold00001: 443392-457263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 443392-448391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 5.0kb downstream 5.0kb downstream 13872 true AmTr_v1.0_scaffold00001: 448392-462263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 457264-462263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 10.0kb upstream 10.0kb upstream 18872 true AmTr_v1.0_scaffold00001: 438392-457263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 438392-448391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 10.0kb downstream 10.0kb downstream 18872 true AmTr_v1.0_scaffold00001: 448392-467263 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.28 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 457264-467263 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048123 5273 Angiosperm View MSA
121348370 5274 Embryophyte View MSA
123425739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain