Gene : evm_27.TU.AmTr_v1.0_scaffold00001.235 A. trichopoda v1.0
Defline:  (1 of 1) PTHR33734:SF5 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Genomic Order:  232
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.235 Secondary Identifier:  ? PAC:31551021
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.235 0.5kb upstream 0.5kb upstream 2344 true AmTr_v1.0_scaffold00001: 4653203-4655546 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 4655047-4655546 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 0.5kb downstream 0.5kb downstream 2344 true AmTr_v1.0_scaffold00001: 4652703-4655046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 4652703-4653202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 1.0kb upstream 1.0kb upstream 2844 true AmTr_v1.0_scaffold00001: 4653203-4656046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 4655047-4656046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 1.0kb downstream 1.0kb downstream 2844 true AmTr_v1.0_scaffold00001: 4652203-4655046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 4652203-4653202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 2.0kb upstream 2.0kb upstream 3844 true AmTr_v1.0_scaffold00001: 4653203-4657046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 4655047-4657046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 2.0kb downstream 2.0kb downstream 3844 true AmTr_v1.0_scaffold00001: 4651203-4655046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 4651203-4653202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 5.0kb upstream 5.0kb upstream 6844 true AmTr_v1.0_scaffold00001: 4653203-4660046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 4655047-4660046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 5.0kb downstream 5.0kb downstream 6844 true AmTr_v1.0_scaffold00001: 4648203-4655046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 4648203-4653202 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 10.0kb upstream 10.0kb upstream 11844 true AmTr_v1.0_scaffold00001: 4653203-4665046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 4655047-4665046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 10.0kb downstream 10.0kb downstream 11844 true AmTr_v1.0_scaffold00001: 4643203-4655046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.235 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 4643203-4653202 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041196 5273 Angiosperm View MSA
121350262 5274 Embryophyte View MSA
123381651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain